[pdbjlvh2]Protein Model on 2za5_A_1_G

Protein Model on 2za5_A_1_G_1 (TEMPLATE: 2za5 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [243 aa]	Tryptase beta 2 :Q6B052_HUMAN
2	b		G 1 (C)	non-polymer(2FF)	(5-(aminomethyl)-2H-spiro[benzofuran-3,4'-piperidine]-1'-yl)(5-(phenylethynyl)furan-2-yl)methanone	300K(P) 301P(D) 338D(Y) (identity: 0.0 %/40.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2za5_A_1 identity=40.3%

queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****  *    ******* *      * **** * * *  ******           *    **     *      *   * **         ****  *:
2za5_A_1       1:IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLEL:  97
SecStr          : BS EE  TTS TTEEEEEE SSS EEEEEEEEEETTEEEE HHHH SS   ---GGGEEEE S SBTTTT  EE EEEEEE TT S TTTS   EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeeeebebbbbbbeeebbbbbbebbbeeeee---eeebebbbbbbebeeeeeeeebeeebebeebeebeebbbbbbbbb:    
Contact         :                                               bb                                     b             

queryA       352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442
                :  *      *  * **       *   **  ***     *       *   **   *   *   *                * ***      ********:
2za5_A_1      98:EEPVKVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSG: 195
SecStr          :SS     SSS   B   TT    TT  EEEEESS SBTTB   TT B EEEE  EE HHHHHHHHHTT  S TTS  S TTEEEE -- SSSB  TTTTT:    
ExpBur          :eeebeeeeebeebebbeeebebeeebebebbbbbbbeeeeebeeeebbbbbebebbebeebbeebbeeeeeeeeeebbeebbbbbb--eeeebbbebbbb:    

queryA       443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486
                :****   *  *   *  *** ***   *** *  *    ***  :
2za5_A_1     196:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 239
SecStr          : EEEEEETTEEEEEEEEEE SSSSBTTB EEEEEGGGGHHHHHH:    
ExpBur          :bbbbbebeeeebbbbbbbbeeebbeeebbbbbbbbbebbebbee:

Protein Model on 2za5_A_1_G_1 (TEMPLATE: 2za5 )

Input Residue Numbers for Focused Sites