[pdbjlvh2]Protein Model on 2fww_C_1_G

Protein Model on 2fww_C_1_G_1 (TEMPLATE: 2fww )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [243 aa]	Tryptase beta-2 :TRYB2_HUMAN
2	b		G 1 (C)	non-polymer(C1R)	4-PIPERIDINEBUTYRATE	296H 435D 436S 437C 438Q 439G 440D 441S 459T(V) 461W 464G 465C 472G (identity: 92.3 %/40.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2fww_C_1 identity=40.3%

queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****  *    ******* *      * **** * * *  ******           *    **     *      *   * **         ****  *:
2fww_C_1       1:IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLEL:  97
SecStr          : BS EE  TTS TTEEEEEE SSS EEEEEEEEEETTEEEE HHHH SS   ---GGGEEEE   SBTTTT   EEEEEEEE TT S TTTS   EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeeeebebbbbbbeeebbbbbbebbbeeeee---eeebebbbbbbebeeeeeeeebeeebebeebeebeebbbbbbbeb:    
Contact         :                                           b                                                        

queryA       352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442
                :  *      *  * **       *   **  ***     *       *   **   *   *   *                * ***      ********:
2fww_C_1      98:EEPVKVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSG: 195
SecStr          :SS     SSS   B   TT    TT EEEEEES  SBTTB   TT B EEEEEEB  HHHHHHHHHTTS S TTS SS TTEEEE -- SS B  TT TT:    
ExpBur          :eeebeeeeebeebebbeeebebeeebebbbbbbbbbeeeeebeeeebbbbbebebeebeebbeebbeeeeeeeeeebbeebbbbbb--eeeebbbeebbb:    
Contact         :                                                                                            bbbbbbb 

queryA       443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486
                :****   *  *   *  *** ***   *** *  *    ***  :
2fww_C_1     196:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 239
SecStr          : EEEEE SSSEEEEEEEEE SSTTBTTB EEEEETGGGHHHHTT:    
ExpBur          :bbbbbeeeeeebbbbbbbbeeebbeeebbbbbbebbebbebbee:    
Contact         :                b b  bb      b

Protein Model on 2fww_C_1_G_1 (TEMPLATE: 2fww )

Input Residue Numbers for Focused Sites