[pdbjlvh2]Protein Model on 1zrk_A_1_E

Protein Model on 1zrk_A_1_E_1 (TEMPLATE: 1zrk )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [237 aa]	Coagulation factor XI :FA11_HUMAN
2	b		E 1 (A)	non-polymer(367)	3-HYDROXYPROPYL 3-[({7-[AMINO(IMINO)METHYL]-1-NAPHTHYL}AMINO)CARBONYL]BENZENESULFONATE	389E(L) 435D 436S(A) 437C 438Q(K) 441S 459T 461W 462G 463S(E) 464G 465C 472G (identity: 69.2 %/44.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1zrk_A_1 identity=44.1%

queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFM-----FYGAGYQVEKVISHPNYDSKTKNNDIA: 347
                :****     * ***** **       * ******   ** *****       *       *** **       * *    *   * *  *       ***:
1zrk_A_1       1:IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCF-YGVESPKILRVYSGILNQSEIAEDTSFFG----VQEIIIHDQYKMAESGYDIA:  95
SecStr          : BS EE  TTSSTTEEEEEE SSS EEEEEEEEEETTEEEE GGGG-TT   GGGEEEEES SBGGG  TT   EE----EEEEEE TT S GGGS   E:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeeebbbbbbbbbeebbbbbbebb-eebeeeeebebbbebbbbeebeeeeeebb----beeebebeeeeebeebebbb:    

queryA       348:LMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447
                :* **       *   *  **  *        **  ***      *    *  **  *     *  **     **  *****   *  * * *******  :
1zrk_A_1      96:LLKLETTVNYTDSQRPISLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRY-RGHKITHKMICAGYREGGKDACKGDSGGPLSC: 194
SecStr          :EEEESS    BTTB   B   GGGTTS  S EEEEES  SSTT    SB EEEE  EE HHHHHHH -TTS   TTEEEE  TT   B  TT TT EEEE:    
ExpBur          :bbebeeebeeeeebeebeebeeeeeebebeebebbbbbbeeeeeeebeebbbbebeebeeeebeeeb-eeeebeeebbbbbeeebeebbbebbbbbbbbb:    
Contact         :                                         b                                             bbbb  b      

queryA       448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490
                :  *  * * * **** ***   ***** **    ***     *:
1zrk_A_1     195:KHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQA: 237
SecStr          :EETTEEEEEEEEEE SSSS TT  EEEEEGGGGHHHHHHHH  :    
ExpBur          :eeeeebbbbbbbbbeeebbeeeebbbbbbbbbbbebbeeeeee:    
Contact         :           b bbbbb      b

Protein Model on 1zrk_A_1_E_1 (TEMPLATE: 1zrk )

Input Residue Numbers for Focused Sites