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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [223 aa] | TRYPSIN :TRY1_BOVIN | |
2 | b | D 1 (A) | non-polymer(FD2) | N-ALPHA-(2-NAPHTHYLSULFONYL)-N(3-AMIDINO-L-PHENYLALANINYL)ISOPIPECOLINIC ACID METHYL ESTER | 296H 337Y 339S 340K(N) 342K(L) 435D 436S 437C 438Q 441S 459T(V) 460S 461W 462G 463S 464G 465C 472G (identity: 83.3 %/41.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1k1j_A_1 identity=41.0% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355 :**** * **** * **** * * * **** * * * * ** * * * **** * ** : 1k1j_A_1 1:IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNI-NVVEGNEQFISA----SKSIVHPSYNSNTLNNDIMLIKLKSAA: 94 SecStr : BS EE TTSSTTEEEEE-SSSEEEEEEEEETTEEEE GGG SS EEEES SST-TS SS EEEEE----EEEEE TT TTT TT EEEEESS : ExpBur :bbeeeebeeeebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebbbbbbbb-eeeeeebbebeb----eeebebeeeeeeebbbbbbbbebeeeb: Contact : b b bb b queryA 356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454 : * * ** * ***** * * ** * * * * ** * *** * * ********** * * : 1k1j_A_1 95:SLNSRVASISLPTSCASAGTQ--CLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKS--AYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGK----: 186 SecStr : SSSS B SS TT E--EEEEES SSS SS EEEEEEB HHHHHH--HSTTT TTEEEES TTSS B TT TT EEEETTE----: ExpBur :eeeeebeebebbeeeeeeeee--bebbbbbbeeeeeeeebeebebbebbbbeeeebee--bbeeebeebbbbbbbeebeebbbebbbbbbbbbeee----: Contact : bbbb b queryA 455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :* * ******* **** * ** : 1k1j_A_1 187:LQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN: 223 SecStr :EEEEEEE SSSSBTTB EEEEEGGGTHHHHHHHHHT : ExpBur :bbbbbbbeeebbeeeebbbbbebbebbebbeebbeee: Contact : bbbbbbb b |