Protein Model on 5mez_A_1_C_1
(TEMPLATE: 
5mez
)Protein Model on 5mez_A_1_C_1
(TEMPLATE: 5mez
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SMAD3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [125 aa] | MH1 domain of human Smad4 :SMAD4_HUMAN | |
| 2 | b | C 1 (D) | polymer(polydeoxyribonucleotide) [15 base] | DNA (5'-D(P*GP*CP*AP*GP*GP*CP*TP*AP*GP*CP*CP*TP*GP*CP*A)-3') | 33K(R) 70S(T) 71L 75L 76Q 78S(A) 81K (identity: 57.1 %/56.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5mez_A_1 identity=56.8% |
queryA 22:EQNGQEEKWCEKAVKSLVKKLKKTGQLD-ELEKAITTQNVN-TKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDE: 119
: * * * * ******* * **** ** ** * ******* *** ***** ********* ** * ** * * :
5mez_A_1 22:RQGGESETFAKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHK-NELKHVKYCQYAFDLKCDS: 120
SecStr : SSS HHHHHHHHHHHHHHTTT HHHHHHHHHHHHTTT S EEE SSS EEETTEEE HHHHHHHHHT TT T-T EEE TT SS GGG SE:
ExpBur :eeeebeeebbeebbeebbeebeeeeeebebbbebbeeeeeeebebbbbeeeeebebebeeeebebbbbbbbbbebeebee-ebbbeeeebeebbeeeeeb:
Contact : b bb bb b b
queryA 120:VCVNPYHYQRVETP: 133
:******** ** *:
5mez_A_1 121:VCVNPYHYERVVSP: 134
SecStr :EE GGGEEE :
ExpBur :bbbbbbbbeeeeee:
|
[assembly_id:1]
[help]