[pdbjlvh2]Protein Model on 5c4v_A_1_D

Protein Model on 5c4v_A_1_D_1 (TEMPLATE: 5c4v )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(SMAD3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [192 aa]	Mothers against decapentaplegic homolog 4 :SMAD4_HUMAN
2	b		D 1 (B)	polymer(polypeptide(L)) [96 aa]	Ski-like protein :SKIL_HUMAN	289H 310D 311S(H) 320C(L) 326W(R) 330T(A) 331V 332C(H) 333K 334I 335P(Y) 336P 337G(S) 382A(P) 384Y (identity: 46.7 %/49.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5c4v_A_1 identity=49.2%

queryA       229:PAFWCSISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYG: 325
                :*  **** * *    *****    * *  ****  ***   ***** **** *  * *  * *** ** *   * * *   **** * ****       *:
5c4v_A_1      29:PEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG: 128
SecStr          : SEEEEEEEEETTEE S  EEEETT  EEEEESS    BTTEEE TT   TT  HHHHHHHTTTTT EEEEEETTTEEEEE  SSS EEEE HHHHHHTT:    
ExpBur          :beebbbbbbbbeeeebeeebebeeebeebbbbeeeeeeeeeebbbeebebeeeeeebeebbeebeebbbbbeeeeeebebebebeebbbbbbebbbeeee:    
Contact         :                                                              b                     bb        b     

queryA       326:WHPA-TVCKIPPGCNLKIFNNQE----------------------------------FAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVT: 390
                :  *   * ** *    * *                                                     *  * * *  *********  * **   :
5c4v_A_1     129:RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDDLRRLCILRMSFVKGWGPDYPRQSIK: 228
SecStr          :  TTS  EEE TT EEEEE HHHHHHHHHHHHHHHHHHH ------------------------------- HHHHHGGGEEEEEES    TTSS  SGG:    
ExpBur          :eeeeebebebeeeeeebbbbbebbeeebeeeeeeeeeeee-------------------------------eeeebeebbbbebbbbebbbeeeeeeebe:    
Contact         :b   bbbbbbbbb                                                                              b b      

queryA       391:STPCWIELHLNGPLQWLDKVL: 411
                : ****** **   ** ** **:
5c4v_A_1     229:ETPCWIEIHLHRALQLLDEVL: 249
SecStr          :GSSSEEEEEEHHHHHHHHHHH:    
ExpBur          :ebbbbbbbebeebeebbeeee:

Protein Model on 5c4v_A_1_D_1 (TEMPLATE: 5c4v )

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