Protein Model on 3kmp_B_1_C_1 (TEMPLATE: 3kmp )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(SMAD3_HUMAN) B 1 (B) polymer(polypeptide(L)) [123 aa] SMAD1-MH1 :Q8CC31_MOUSE
2 b C 1 (C) polymer(polydeoxyribonucleotide) [15 base] 5'-D(P*AP*TP*CP*AP*GP*TP*CP*TP*AP*GP*AP*CP*AP*TP*A)-3' 74R 76Q 81K 100H 101H (identity: 100.0 %/70.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3kmp_B_1 identity=70.5%
queryA         8:TPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKT-GQLDELEKAITTQNVNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAM: 106
                :* * ******** *     **** ****  *******  *   *****         * ************************* ****** *****   :
3kmp_B_1       2:TSPAVKRLLGWKQGDE---EEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPL:  98
SecStr          :  HHHHHHHHT    H---HHHHHHHHHHHHHHHHTTSTTHHHHHHHHHH TTS     EEE  SSS EEETTEEE HHHHHHHHHT TT   GGGEEE :    
ExpBur          :eeeeeeeeeeeeeeee---eeebeeebeebbeeebeeeeebeebbeebeeeeeeebeebbbebeeebebebeeeeebbbbbbbeeeebeebeeeebbeee:    
Contact         :                                                                   b b    b                  bb     

queryA       107:ELCEFAFNMKKDEVCVNPYHYQRVET: 132
                :* *** *  *  *** ***** *** :
3kmp_B_1      99:ECCEFPFGSKQKEVCINPYHYKRVES: 124
SecStr          :TT SS GGG  SEEE  GGGEEE   :    
ExpBur          :eebeebbeeeeeebbbbbebbeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123