Protein Model on 3gmj_B_1_D_1
(TEMPLATE: 
3gmj
)Protein Model on 3gmj_B_1_D_1
(TEMPLATE: 3gmj
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SMAD3_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [199 aa] | Protein mothers against dpp :MAD_DROME | |
| 2 | b | D 1 (C) | polymer(polypeptide(L)) [188 aa] | Protein mothers against dpp :MAD_DROME | 247T(V) 249H 360F 361E 364Y 365Q(E) 367T 368R(K) 371T 373R 397E 399H 401N(H) 404L 405Q 407L 408D 411L 412T 416S 417P 419I(N) 421C(I) 422S 423S 424V 425S (identity: 77.8 %/78.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3gmj_B_1 identity=78.3% |
queryA 228:EPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSN-SERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGW: 326
:***** ** ***** **** ** * ***** *** * * *** ******* * ****** ** *** *** ************* *** * :
3gmj_B_1 47:EPAFWASIAYYELNCRVGEVFHCNNNSVIVDGFTNPSNNSDRCCLGQLSNVNRNSTIENTRRHIGKGVHLYYVTGEVYAECLSDSAIFVQSRNCNYQHGF: 146
SecStr : S SEEEEEEETTEE S EEE SSEEEEESS SSSEEE SS TT HHHHHHHHHHTT EEEEE SS EEEEE SSS EEEE TTHHHHT :
ExpBur :eeeebbbbbbbbeeeebeeebebeeeebebbeeeeeeeeeeebbbeebebeebeeebeebbeebeebbbbeeeebbbebebbbeebbbbbbebbbeeeee:
Contact : b b
queryA 327:HPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS: 425
:** ********* ********** ** **** ****** ** **************** ** ********* ** **************** ****:
3gmj_B_1 147:HPSTVCKIPPGCSLKIFNNQEFAQLLSQSVNNGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNAISSVS: 245
SecStr : TT EEE TT EEEEE HHHHHHHHHHTGGG HHHHHTTHHHHEEEEEES STTSS SGGGSSSEEEEEEHHHHHHHHHHHHTS SS S :
ExpBur :eeeeebebeeeeeeebbbbeebeebbeebeeeeeeebeebeebbbbebbbeebbbeeeeeeebeebbbbbbbebebbeeebeeebeeeeeeeeeeeeee:
Contact : bb bb bb b b b b b bb bb bb bb b bbbbb
|
[assembly_id:2]
[help]