#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6yva_A_1_B_1

Protein Model on 6yva_A_1_B_1 (TEMPLATE: 6yva )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [283 aa] Replicase polyprotein 1a :R1A_SARS2
2 b B 1 (C) polymer(polypeptide(L)) [155 aa] Ubiquitin-like protein ISG15 :ISG15_MOUSE 807D 811V 814F 815E 820T 822P 851W 854N 856C(S) 857Y 901N 907L 908G 909D 911R 912E 915S 916Y 919Q 948E 953M 993P 1009Y 1013Y 1014Q 1015C 1016G 1018Y 1046T (identity: 96.6 %/91.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6yva_A_1 identity=91.3%
queryA       746:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 845
                :****************************************************************************************************:
6yva_A_1       1:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 100
SecStr          :    EEEEEESSSSS EEEEE S   TTTTT S EETTEE TT    TT SS EEE    SHHHHHHHHHHH    TTHHHHHHHHHHHHTTS   EETT:    
ExpBur          :eeeeeebebbbbeeeeeeeebeeebebeeebbebbeebeebeeeebeeebeebebbbbbeeeebeebbeebbebeeeebbbebbebbeebeebebeebee:    
Contact         :                                                             b   b  bb    b b                       

queryA       846:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK: 945
                :********** *************************************************************************           *****:
6yva_A_1     101:LTSIKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVXXXXXXXXXXXQTTLK: 200
SecStr          :EE     TTTHHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHTT  TT    HHHHHHHHHHTB  TT EE -----------   EE:    
ExpBur          :bbbbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbebebeeeeebeebbeebbeebebeebbbe-----------eeeee:    
Contact         :     b  b bb                                           b     bbb bb  bb  b                          

queryA       946:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI:1045
                :******************               *******************************************************************:
6yva_A_1     201:GVEAVMYMGTLSYEQFKKXXXXXXXXXXXXXXXLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI: 300
SecStr          :SGGGS  BS S STTTT ---------------   EESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEE SSS EEEETTEEE  SSEEEEE:    
ExpBur          :bbebbbeeeebeeebeee---------------eeebbbebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebebbbbeebbbbbebeeeeeeeebebbb:    
Contact         :  b    b                                       b               b   bbbb b                           

queryA      1046:TDVFYKENS:1054
                :*********:
6yva_A_1     301:TDVFYKENS: 309
SecStr          :EEEEEE   :    
ExpBur          :bbbbbebee:    
Contact         :b                                                                                                   


Input Residue Numbers for Focused Sites

ex) 2,15,123