#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6xaa_A_1_B_1

Protein Model on 6xaa_A_1_B_1 (TEMPLATE: 6xaa )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [309 aa] Non-structural protein 3 :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [76 aa] Ubiquitin-propargylamide :J3QS39_HUMAN 854N 855N 856C 857Y 906E 907L 908G 909D 911R 912E 944L 948E 952Y 953M 970T 977K 992P 1009Y 1013Y 1014Q 1015C 1016G 1017H 1018Y 1046T (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6xaa_A_1 identity=100.0%
queryA       750:IKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSI: 849
                :****************************************************************************************************:
6xaa_A_1       8:IKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSI: 107
SecStr          : EEEEESSSSS EEEE  TTS HHHHHSSEEETTEE TT    GGGTT EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTTS   EETTEE  :    
ExpBur          :eebebbbbeeeeeeeebeeebbbeeebeebbeebeebeeeebbeebeebebbbeeeeeebbebbeebbeeeeeebbbbbbebbeebeebebeebeebbbb:    

queryA       850:KWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEA: 949
                :****************************************************************************************************:
6xaa_A_1     108:KWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEA: 207
SecStr          : S TT HHHHHHHHHHTTS   BSSHHHHHHHHHHHHT  HHHHHHHHHHTT  TT    HHHHHHHHHHTB  TT EEEEEEEETTTEEEEEEEETHHH:    
ExpBur          :eeeeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbebbbbbbbbbebeeeeebebeebbeebbeebebeebebbbbeebeeeeeeeeeeebbeb:    
Contact         :    bbbb                                                bbbb bb                               b   b 

queryA       950:VMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVF:1049
                :****************************************************************************************************:
6xaa_A_1     208:VMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVF: 307
SecStr          :HEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEEETTEEEEEEEEESSSEEEEETTEEEEESEEEEEEEEEE:    
ExpBur          :bebeebbbbeebeebbeeebeeeeebebebbebbbebbbbbbeeeeeebeeeebebbbbbeeeeeeeebebbbbeebbbbbbbeeeeeeeebebbbbbbb:    
Contact         :  bb                b      b              b                b   bbbbbb                           b   

queryA      1050:YKENSYTTT:1058
                :*********:
6xaa_A_1     308:YKENSYTTT: 316
SecStr          :EE SEEE  :    
ExpBur          :bebeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123