#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [317 aa] | Papain-like protease :R1AB_CVEMC | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [74 aa] | Polyubiquitin-B :UBB_HUMAN | 854N 855N 856C(S) 857Y 900C(G) 907L(P) 908G(D) 909D 911R(S) 912E(R) 915S(H) 916Y(T) 919Q(A) 952Y 953M(V) 993P 1009Y(F) 1012N(E) 1014Q(A) 1015C(V) 1016G 1017H 1018Y (identity: 39.1 %/31.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4wur_A_1 identity=31.1% |
queryA 749:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAF-EYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 847 :** * *** * * * ** * * *** * * * * * * * ** ** * * ** : 4wur_A_1 9:TIEVLVTVDGVNFRTVVLNNKNTYRSQLGCVFFNGADISDTIPDEKQNGHSLYLADNLTADETKALKELYGPVDPTFLHRFYSLKAAVHGWKMVVCDKVR: 108 SecStr : EEEEEESSSS EEEEEE SSS HHHHT SEEETTEE TTS GGGTT EEEE SS HHHHHHHHHHH S TTHHHHHHHHHHHTTT EEEETTEE: ExpBur :ebebebbbeeeeeeebebeeeeebeeebbbbbbeeeebbeeebeeebeeeebebbeeeeeebeebbeeebbeeeeebbebbbebeeebeebeeeeeeeee: queryA 848:SIKWADNNCYLATALLTLQQI-ELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLD-SCKRVLNVVCKTCGQQQTTLK: 945 :* * *** ** ** ** **** * * * *** ** * * * * * * * * * ** * : 4wur_A_1 109:SLKLSDNNSYLNAVIMTLDLLKDIKFVIPALQHAFMKHKGGDSTDFIALIMAYGNCTFGAPDDASRLLHTVLAKAELCCSARMVWREWCNVCGIKDVVLQ: 208 SecStr :EE TT HHHHHHHHHHTT TTEEESSHHHHHHHHHHHHT HHHHHHHHHHTT TTS HHHHHHHHHTTEEESS EEEEEEEETTTEEEEEEEE: ExpBur :bbeeeeebbbbbbbbbbbeebeebbbebebbeebbeebeeeebbbbbbbbbbbbebeeeeeeebbebbeebbeebebeeebebbbeeebeeeeeeeeeee: Contact : bbbb b bbb bb bb b queryA 946:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGT---FTCASEYTG-NYQCGHYKHITSKETLYC-IDGALLTKSSE:1040 :* * * * * * ** ** * * * * * * *** * * * * * * : 4wur_A_1 209:GLKACCYVGVQTVEDLRARMTYVCQCGGERHRQLVEHTTPWLLLSGTPNEKLVTTSTAPDFVAFNVFQGIETAVGHYVHARLKGGLILKFDSGTVSKTSD: 308 SecStr :GGGGGEEES SHHHHHS EEEE TTSSEEEEEEEEEEEEEEEEEEEEEEEEEESSS S SEEEEEES SSS EEEEEEESSSSEEEEETTEEEEESE: ExpBur :ebebbbeeebbebeebeeeeebeeeeeeebebebebbebebbbbbbeeeeeebeeeeeeeeebbbbbeeeeeeeebbbbbbbeeebbebbebeeeeeeee: Contact : bb b b b bbbbb queryA 1041:YKGPITDVFYKENSYTT:1057 : * *** * : 4wur_A_1 309:WKCKVTDVLFPGQKYSS: 325 SecStr :EEEEEEEEEEEEEEEE : ExpBur :eebbbbbbbbeebebee: |