#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 4wur_A_1_B_1

Protein Model on 4wur_A_1_B_1 (TEMPLATE: 4wur )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [317 aa] Papain-like protease :R1AB_CVEMC
2 b B 1 (B) polymer(polypeptide(L)) [74 aa] Polyubiquitin-B :UBB_HUMAN 854N 855N 856C(S) 857Y 900C(G) 907L(P) 908G(D) 909D 911R(S) 912E(R) 915S(H) 916Y(T) 919Q(A) 952Y 953M(V) 993P 1009Y(F) 1012N(E) 1014Q(A) 1015C(V) 1016G 1017H 1018Y (identity: 39.1 %/31.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4wur_A_1 identity=31.1%
queryA       749:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAF-EYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 847
                :** *  ***  *  * *     **  * *     ***     *     *   *   *       *  * *   ** ** *  *       **        :
4wur_A_1       9:TIEVLVTVDGVNFRTVVLNNKNTYRSQLGCVFFNGADISDTIPDEKQNGHSLYLADNLTADETKALKELYGPVDPTFLHRFYSLKAAVHGWKMVVCDKVR: 108
SecStr          : EEEEEESSSS EEEEEE SSS HHHHT SEEETTEE TTS   GGGTT EEEE SS  HHHHHHHHHHH S  TTHHHHHHHHHHHTTT  EEEETTEE:    
ExpBur          :ebebebbbeeeeeeebebeeeeebeeebbbbbbeeeebbeeebeeebeeeebebbeeeeeebeebbeeebbeeeeebbebbbebeeebeebeeeeeeeee:    

queryA       848:SIKWADNNCYLATALLTLQQI-ELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLD-SCKRVLNVVCKTCGQQQTTLK: 945
                :* *  *** **     **      **  **** *      *    * *** ** * * *   *           * *  *   *    *  **     * :
4wur_A_1     109:SLKLSDNNSYLNAVIMTLDLLKDIKFVIPALQHAFMKHKGGDSTDFIALIMAYGNCTFGAPDDASRLLHTVLAKAELCCSARMVWREWCNVCGIKDVVLQ: 208
SecStr          :EE   TT HHHHHHHHHHTT TTEEESSHHHHHHHHHHHHT  HHHHHHHHHHTT  TTS   HHHHHHHHHTTEEESS  EEEEEEEETTTEEEEEEEE:    
ExpBur          :bbeeeeebbbbbbbbbbbeebeebbbebebbeebbeebeeeebbbbbbbbbbbbebeeeeeeebbebbeebbeebebeeebebbbeeebeeeeeeeeeee:    
Contact         :      bbbb                                           b      bbb bb  bb  b                           

queryA       946:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGT---FTCASEYTG-NYQCGHYKHITSKETLYC-IDGALLTKSSE:1040
                :*  *  * *    *         * **      **    *    *  *        *   *       *     *** *   *  *    *     * * :
4wur_A_1     209:GLKACCYVGVQTVEDLRARMTYVCQCGGERHRQLVEHTTPWLLLSGTPNEKLVTTSTAPDFVAFNVFQGIETAVGHYVHARLKGGLILKFDSGTVSKTSD: 308
SecStr          :GGGGGEEES  SHHHHHS EEEE TTSSEEEEEEEEEEEEEEEEEEEEEEEEEESSS  S SEEEEEES SSS  EEEEEEESSSSEEEEETTEEEEESE:    
ExpBur          :ebebbbeeebbebeebeeeeebeeeeeeebebebebbebebbbbbbeeeeeebeeeeeeeeebbbbbeeeeeeeebbbbbbbeeebbebbebeeeeeeee:    
Contact         :      bb                                       b                  b   b bbbbb                       

queryA      1041:YKGPITDVFYKENSYTT:1057
                : *   ***      *  :
4wur_A_1     309:WKCKVTDVLFPGQKYSS: 325
SecStr          :EEEEEEEEEEEEEEEE :    
ExpBur          :eebbbbbbbbeebebee:    


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