#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 4rna_A_1_D_1

Protein Model on 4rna_A_1_D_1 (TEMPLATE: 4rna )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [321 aa] papain-like protease :K4LC41_9BETC
2 b D 1 (A) non-polymer(PO4) PHOSPHATE ION 930L(W) 952Y 960Q(D) 961F(L) 963K(A) 977K(R) (identity: 16.7 %/31.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4rna_A_1 identity=31.1%
queryA       749:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAF-EYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 847
                :** *  ***  *  * *     **  * *     ***     *     *   *   *       *  * *   ** ** *  *       **        :
4rna_A_1       5:TIEVLVTVDGVNFRTVVLNNKNTYRSQLGCVFFNGADISDTIPDEKQNGHSLYLADNLTADETKALKELYGPVDPTFLHRFYSLKAAVHGWKMVVUDKVR: 104
SecStr          :EEEEEEESSSS  EEEEEESSS HHHHT SEEETTEE TTS   GGGTT EEEE SS  HHHHHHHHHHH S  TTHHHHHHHHHHHHTT  EEEETTEE:    
ExpBur          :ebebebbbbeeeeeebebbeeebbeeebbbbbeeeeebbeeebeeebeeeebebbeeeeeebeebbeeebbeeeeebbeebbebeeebeebebbeeeebb:    

queryA       848:SIKWADNNCYLATALLTLQQI-ELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLD-SCKRVLNVVCKTCGQQQTTLK: 945
                :* *  *** **     **      **  **** *      *    * *** ** * * *   *           * *  *   *    *  **     * :
4rna_A_1     105:SLKLSDNNUYLNAVIMTLDLLKDIKFVIPALQHAFMKHKGGDSTDFIALIMAYGNCTFGAPDDASRLLHTVLAKAELCCSARMVWREWCNVCGIKDVVLQ: 204
SecStr          :EE   TTTHHHHHHHHHHTT  SEEESSHHHHHHHHHHHTT  HHHHHHHHHHHT  TTS   HHHHHHHHHTTEEESS  EEEEEEEETTTEEEEEEEE:    
ExpBur          :bbeeeeebbbbbbbbbbbbebeebebebebbeebbeebeeeebbbbbbbbbbbbebeeeeeeebbebbeebbeebebeeebebbbebbbeeeeeeeeeee:    
Contact         :                                                                                    b               

queryA       946:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGT---FTCASEYTG-NYQCGHYKHITSKETLYC-IDGALLTKSSE:1040
                :*  *  * *    *         * **      **    *    *  *        *   *       *     *** *   *  *    *     * * :
4rna_A_1     205:GLKACCYVGVQTVEDLRARMTYVCQCGGERHRQLVEHTTPWLLLSGTPNEKLVTTSTAPDFVAFNVFQGIETAVGHYVHARLKGGLILKFDSGTVSKTSD: 304
SecStr          :GGGGGEEES SSHHHHHS EEEE TTSSEEEEEEEEEE SEEEEEEEEEEEEEESTT  S  EEEEEE TTTTS EEEEEEEETTEEEEE SS EEEESE:    
ExpBur          :ebebbbeeeebbbeebeeeeeeebeeeeebbebbbebebebbbbbeeeeeeebbbeeeeebebbbbbeeeeeeeebbbbbbeeeeebbebebeeeeeeee:    
Contact         :      b       bb b             b                                                                    

queryA      1041:YKGPITDVFYKENSYTT:1057
                : *   ***      *  :
4rna_A_1     305:WKCKVTDVLFPGQKYSS: 321
SecStr          :EEEEEEEEEEE  EEE :    
ExpBur          :bebebbbbbbeebeeee:    


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