#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 4pt5_A_2_A_1

Protein Model on 4pt5_A_2_A_1 (TEMPLATE: 4pt5 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 2 (A) polymer(polypeptide(L)) [321 aa] Papain-like protease :K4LC41_9BETC
2 b A 1 (A) polymer(polypeptide(L)) [321 aa] Papain-like protease :K4LC41_9BETC 762H(R) 763T 764Q(V) 773G(R) 775Q 776F(L) 804P(D) 805N 806D(L) 807D(T) 808T(A) 809L(D) 821D 822P 823S(T) 826G(H) 827R 901N 912E(R) 915S(H) 916Y(T) 932V(E) 942T(V) 952Y 953M(V) 954G 955T(V) 965V(M) 967I(Y) 968P(V) 975A(R) 977K(R) 992P(T) 994A(N) (identity: 26.5 %/31.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4pt5_A_2 identity=31.1%
queryA       749:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAF-EYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 847
                :** *  ***  *  * *     **  * *     ***     *     *   *   *       *  * *   ** ** *  *       **        :
4pt5_A_2       5:TIEVLVTVDGVNFRTVVLNNKNTYRSQLGCVFFNGADISDTIPDEKQNGHSLYLADNLTADETKALKELYGPVDPTFLHRFYSLKAAVHGWKMVVUDKVR: 104
SecStr          :EEEEEEESSSS  EEEEEESSS HHHHT SEEETTEE TTS   TT TT EEEE SS  HHHHHHHHHHH S  TTHHHHHHHHHHHGGG  EEETTS E:    
ExpBur          :ebebebbbbeeeeeebebeeeeebeeebbbbbeeeeebbeeebeeebeeeebebbeeeeeebeebbeeebbeeeeebbeebbebeeebeebeeeeeeebe:    
Contact         :             bbb        b bb                           bbbbbb            bbb  bb                    

queryA       848:SIKWADNNCYLATALLTLQQI-ELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLD-SCKRVLNVVCKTCGQQQTTLK: 945
                :* *  *** **     **      **  **** *      *    * *** ** * * *   *           * *  *   *    *  **     * :
4pt5_A_2     105:SLKLSDNNUYLNAVIMTLDLLKDIKFVIPALQHAFMKHKGGDSTDFIALIMAYGNCTFGAPDDASRLLHTVLAKAELCCSARMVWREWCNVCGIKDVVLQ: 204
SecStr          :EE   TT HHHHHHHHHHTT  SEEESSHHHHHHHHHHHHT  HHHHHHHHHHTT  TT    HHHHHHHHHTTEEESS  EEEEEEEETTTEEEEEEE :    
ExpBur          :bbeeeeebbbbbbbbbbbeebeebebebebbbebbeebeeeebbbbbbbbbbbbebeeeeeeebbebbeebbeebebeeebebbbeebbeeeeeeeeeee:    
Contact         :                                                      b          b  bb                b         b   

queryA       946:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGT---FTCASEYTG-NYQCGHYKHITSKETLYC-IDGALLTKSSE:1040
                :*  *  * *    *         * **      **    *    *  *        *   *       *     *** *   *  *    *     * * :
4pt5_A_2     205:GLKACCYVGVQTVEDLRARMTYVCQCGGERHRQLVEHTTPWLLLSGTPNEKLVTTSTAPDFVAFNVFQGIETAVGHYVHARLKGGLILKFDSGTVSKTSD: 304
SecStr          :THHHHEEES SSHHHHSS EEEE TTSSEEEEEEEEEE SEEEEEEEEEEEEEESTT  S SEEEEE S TTS   EEEEEEETTEEEEEETTEEEEESE:    
ExpBur          :ebebbbeeeebbbeebeeeeeeebeeeeeebebbbebebebbbbbeeeeeeebbbeeeeebebbbbbeeeeeeeeebbbbbbeeeebbebebbeeeeeee:    
Contact         :      bbbb         b bb      b b              b b                                                   

queryA      1041:YKGPITDVFYKENSYTT:1057
                : *   ***      *  :
4pt5_A_2     305:WKCKVTDVLFPGQKYSS: 321
SecStr          :EEEEEEEEEEE  EEE :    
ExpBur          :bebebbbbbbeebebeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123