#WARNING:no index is registered index "YP_009725295.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725295.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7cmd_B_1_J_1

Protein Model on 7cmd_B_1_J_1 (TEMPLATE: 7cmd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) B 1 (B) polymer(polypeptide(L)) [308 aa] Non-structural protein 3 :R1AB_SARS2
2 b J 1 (B) non-polymer(ZN) ZINC ION 1727D 1728V 1729R 1836Y 1864T 1865D (identity: 100.0 %/97.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7cmd_B_1 identity=97.5%
queryA      1564:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG:1663
                :****************************************************************************************************:
7cmd_B_1       2:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 101
SecStr          :   EEEEEEESSSSS EEEEEETTS HHHHTSSEEETTEE TT    STTTT EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTSS   EETT:    
ExpBur          :eeeebebbbbbbeeeebeeebbbeebbeeebbebbbebeebeeeebeeebeeebbbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebbe:    

queryA      1664:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK:1763
                :****************************************************************************************************:
7cmd_B_1     102:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK: 201
SecStr          :EE     TTTHHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHTT  TT    HHHHHHHHHHTB  TT EEEEEEEETTTEEEEEEEE:    
ExpBur          :ebbbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeebebbebbbbbbbbbeeeeeebbebeebbeebbeebebeebebbbbbeeeeeeeeeeeee:    
Contact         :                                                               bbb                                  

queryA      1764:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI:1863
                :**********************        **********************************************************************:
7cmd_B_1     202:GVEAVMYMGTLSYEQFKKGVQIXXXXXXXXTKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI: 301
SecStr          :THHHHEEES S HHHHHS B  -------- BEEEEEESSEEEEEEEEEEEEEETTS SEEEEEESSTTS EEEEEEESSSEEEEETTEEEEESEEEEEE:    
ExpBur          :bbebbbbeebbbbeebbebbee--------ebbbebbebbbbbbbbeeeeeebeeeebbbbbbbeeeeeebebebbbbeebbbbbbbeeeeeeeebebbb:    
Contact         :                                                                        b                           

queryA      1864:TDVFYKENSYTTTIK:1878
                :***************:
7cmd_B_1     302:TDVFYKENSYTTTIK: 316
SecStr          :EEEEEE SEEE    :    
ExpBur          :bbbbbeeeebebeee:    
Contact         :bb                                                                                                  


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