Protein Model on 6nek_A_1_A_2 (TEMPLATE: 6nek )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(PALS1_HUMAN) A 1 (A) polymer(polypeptide(L)) [86 aa] Consensus PDZ domain
2 b A 2 (A) polymer(polypeptide(L)) [86 aa] Consensus PDZ domain 278V(I) 279I(F) 280I(V) 281S 282R(S) 283I(V) 284V 288A(P) 289A 294L(R) 295L 298G 300E(R) 301V(I) 302L 308E(S) 310R(E) 314V(L) 318F(V) 321L 326G(T) 327T 328L(V) 329T 330F(L) 331V(T) 332L(V) 333I(L) (identity: 32.1 %/33.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6nek_A_1 identity=33.9%
queryA       278:VIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLI: 333
                :   *  * ** *   * *  **  ** **    *    *   **     * *    :
6nek_A_1      26:IFVSSVVPGGPAARAGRLRVGDRILEVNGVSVEGLTLEEAVKLLRSSGTTVTLTVL:  81
SecStr          : B     TTSTTTSTTS  TT EEEEETTEE TT  HHHHHHHHHTS SS  EEEE:    
ExpBur          :bebeeeeeebeeebeeebeeebebbbbeeeebeeeeeeebeeeeeebeeeeeeeee:    
Contact         :bbbbbbb   bb    bb  b bbb     b b   b   b  b    bbbbbbbb                                            


Input Residue Numbers for Focused Sites

ex) 2,15,123