Protein Model on 2xkx_A_1_B_1
(TEMPLATE: 
2xkx
)Protein Model on 2xkx_A_1_B_1
(TEMPLATE: 2xkx
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(PALS1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [721 aa] | DISKS LARGE HOMOLOG 4 :DLG4_RAT | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [718 aa] | DISKS LARGE HOMOLOG 4 :DLG4_RAT | 279I(F) 280I 281S 282R(F) 283I 284V(L) 294L(E) 295L 296H(R) 297E(K) 298G 299D 300E(Q) 301V(I) 302L 303E(S) 310R 315N(E) 316E(Q) 317V(A) 318F(A) 321L 325H(G) 326G(Q) 327T 328L(V) 330F(I) 331V(I) 336Q(A) 340P 342P(E) 343A(Y) 351K(R) 352A 353H(L) 354F 355D 357D 359S(T) 360D(K) 361D 366C 367R(G) 369L 370G(A) 371L 373F 374Q(R) 375K(F) 377D 378I(V) 379L 380H 381V 383S(D) 384Q(A) 385E(G) 386D 387P(E) 388N(E) 389W 393Y(R) 394R 395E(V) 397D(S) 401Q(T) 403L(D) 404A(I) 405G 406L(F) 407V(I) 408P 409G(S) 410K 411S(R) 412F(R) 413Q(V) 414Q(E) 415Q(R) 416R 419M(S) 420K(R) 446K(E) 461E(D) 463I(V) 465T(S) 468E(T) 479K(A) 480R 481P 482I 483I 484L(I) 485I(L) 486G 487P 488Q(T) 489N(K) 490C(D) 491G(R) 492Q(A) 493N 494E(D) 498R(D) 499L 500M(L) 501N(S) 502K(E) 503E(F) 504K(P) 506R(K) 507F 508A(G) 509S 510A(C) 511V 512P 513H 515T 516R 517S(P) 518R(K) 519R 523V(I) 524A(D) 525G 526R 527D 528Y 529H 530F 531V 532S 535A(K) 536F(M) 537E 538A(K) 539D 540I 542A 543G(H) 544K 545F 546I 547E 548H(A) 549G 550E(Q) 557G 558T 559S 560I(V) 562S 563V 564R 566V 567I(A) 570G 571K 572I(H) 573C 574L(I) 575L 576S(D) 577L(V) 578R(S) 579T(A) 580Q(N) 581S(A) 582L(V) 584T(R) 585L 586R(Q) 587N(A) 588S(A) 589D(H) 590L 591K(H) 592P 593Y(I) 594I(A) 595I 596F 597I 598A(R) 599P 600P(R) 601S 602Q(L) 603E 604R(N) 605L(V) 606R(L) 607A(E) 608L(I) 613G(N) 617K(T) 618P(E) 619E 620E(Q) 621L(A) 622R 623E(K) 624I(A) 625I(F) 626E(D) 627K(R) 628T(A) 629R(T) 630E(K) 631M(L) 632E 633Q 634N(E) 635N(F) 636G(T) 637H(E) 638Y(C) 639F 641T(A) 642A(I) 643I(V) 644V(E) 645N(G) 647D(S) 648L(F) 649D(E) 650K(E) 651A(I) 652Y 653Q(H) 654E(K) 655L(V) 656L(K) 657R 658L(V) 659I 660N(E) 661K(D) 663D(S) 664T(G) 671S(A) (identity: 38.0 %/36.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2xkx_A_1 identity=36.6% |
queryA 276:DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPPAK--ETVIH------------------------: 349
: ** * ** * ** * ** * ** * * * * * ** * ** :
2xkx_A_1 331:EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII----AQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKR: 426
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
Contact : bbbbbb bbbbbbbbbb b bbbb b bbbb bb b b bb bb bbbbb b bbbbbbb
queryA 350:---VKAHFDYDPSDDPYVPCREL--GLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKK: 444
: * **** * * * *** ** **** * **** * * * * ** * * :
2xkx_A_1 427:GFYIRALFDYDKTKD----CGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRL----------KAKDWGSSSGSQG: 512
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
Contact :bbb bbbbb b bbb bb bbbbb bbb bbbbb bbbbbbb bbb b b bbbbbbbbbbbbbb bb
queryA 445:RKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVS-RQAFEADIAAG: 543
:* * ** **** ** * * * * * ****** * * ******** * * ** * :
2xkx_A_1 513:RE--------------DSVLSYETVT--QMEVHYARPIIILGPTKDRAND---DLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIRAH: 593
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
Contact : b b b b b bbbbbbbbbbbbbbbb bbbbbbb bbbbbbbb bbbbb bbbbbbbbbb bbbbbb bb
queryA 544:KFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAI: 643
:**** * ***** *** * ** * * * * * *** * * * * * * ** * :
2xkx_A_1 594:KFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEI----NKRITEEQARKAFDRATKLEQEFTECFSAIV: 689
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
Contact :bbbbbbb bbbb bbb bb bbbbbbbbbbbbb bbbbbbbbbbbbbbbbbbbbbbbbb b bbbbbbbbbbbbbbbbbbbbbbb bbb
queryA 644:VNSDLDKAYQELLRLINKLDTEPQWVPS: 671
: * * * * *** :
2xkx_A_1 690:EGDSFEEIYHKVKRVIEDLSGPYIWVPA: 717
SecStr :----------------------------:
ExpBur :----------------------------:
Contact :bb bbbbbbbbbbbbbbb bb b
|
[assembly_id:1]
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