Protein Model on 5nfy_F_1_B_1
(TEMPLATE: 
5nfy
)Protein Model on 5nfy_F_1_B_1
(TEMPLATE: 5nfy
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | F 1 (N) | polymer(polypeptide(L)) [133 aa] | Polyprotein 1ab :Q1T6X8_CVHSA | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [514 aa] | Polyprotein 1ab :Q1T6X8_CVHSA | 1A 2G 3N 4A 5T 6E 7V 8P 11S 12T 14L 15S 16F 18A 19F 20A 21V 25K 26A 29D 30Y 33S 40N 41C 42V 43K 44M 45L 58T 59P 69G 71A 72S 78R 79C 80H 83H 88G 89F 90C 93K 94G 95K 96Y (identity: 100.0 %/98.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5nfy_F_1 identity=98.5% |
queryA 1:AGNATEVPANSTVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIP: 100
:********************** *****************************************************************************:
5nfy_F_1 8:AGNATEVPANSTVLSFCAFAVDPAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIP: 107
SecStr : S GGGHHHHHHHHH SSHHHHHHHHHHTT B S S SEESS SSEEEEEGGGG HHHHHT SSSS SSTTSEEEEE:
ExpBur :eeeeeeeeebeebbeebeeeeebeebbeeeeeeebeebeeeeeeebeeeeebebebeeeebeeebbbbbbebbbbbbbbeeeeeeeeeebebeeeebbbb:
Contact :bbbbbbbb bb bbb bbbb bb bb b bbbbbb bb b bb bbb b bbb bbbb
queryA 101:TTCANDPVGFTLKNTVCTVCGMWKGYGCSCD: 131
:************ ******************:
5nfy_F_1 108:TTCANDPVGFTLRNTVCTVCGMWKGYGCSCD: 138
SecStr :TTTTT HHHHHHH B TTTSSBTTBB :
ExpBur :eebbebbbbbbeeeeebeebebbeeeebeee:
|
[assembly_id:2]
[help]