Protein Model on 1u7f_A_1_B_1 (TEMPLATE: 1u7f )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(SMAD3_HUMAN) A 1 (A) polymer(polypeptide(L)) [198 aa] Mothers against decapentaplegic homolog 3 :SMAD3_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [193 aa] Mothers against decapentaplegic homolog 4 :SMAD4_HUMAN 238Y 241N 243R 246E 247T 360F 364Y 367T 390T 395W 397E 399H 401N 404L 405Q 407L 408D 411L 412T 416S 417P 419I 420R 421C 422S 423S(U) 424V (identity: 96.3 %/99.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1u7f_A_1 identity=99.5%
queryA       228:EPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWH: 327
                :****************************************************************************************************:
1u7f_A_1       1:EPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWH: 100
SecStr          :  SSSEEEEEEETTEE S  EEE SSEEEEESS  SS TTEEEGGG   TT  HHHHHHGGG TT EEEEEETTEEEEEE SSS EEEE HHHHHHTT  :    
ExpBur          :eeeebbbbbbebeeeebeeebebeeeebbbbeeeeeeeeeebbbeebebeebeeebeebbeebeebbebebeeeebebebbbeebbbbbbbbbbeeeeee:    
Contact         :          b  b b  bb                                                                                

queryA       328:PATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSSV: 424
                :*********************************************************************************************** *:
1u7f_A_1     101:PATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCSUV: 197
SecStr          :TT  EEE TT EEEEEEHHHHHHHHHTTGGG HHHHHGGGGGGEEEEEESS  STTSS  SGGGSSSEEEEEEHHHHHHHHHHHTTS   SS   S :    
ExpBur          :eeebbebeeeeeeebbbbeebeebbeebeeeeeeebeebeebbbbebbbbebbbeeeebeebeebbbbbbbebebbeeebeeebeebeeeeeeeeee:    
Contact         :                                b   b  b                      b    b b b b  bb bb  bb   bb bbbbbb   


Input Residue Numbers for Focused Sites

ex) 2,15,123