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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SMAD3_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [193 aa] | Mothers against decapentaplegic homolog 4 :SMAD4_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [97 aa] | Ski oncogene :SKI_HUMAN | 289H 310D 311S(H) 320C(L) 324Y(A) 326W(R) 330T(A) 331V 332C(H) 333K 334I 335P(Y) 336P 337G(S) 338C(A) 340L(I) 382A(P) 383E(D) 384Y (identity: 36.8 %/48.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1mr1_B_1 identity=48.9% |
queryA 229:PAFWCSISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYG: 325 :* **** * * ***** * * **** *** ***** **** * * * * *** ** * * * * **** * **** *: 1mr1_B_1 3:PEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG: 102 SecStr : SEEEEEEEEETTEE S EEEETT EEEEES S SSSEEEGGG TT HHHHHHHHTTTT EEEEEETTTEEEEEE SSS EEEE HHHHHHHT: ExpBur :beebbbbbbbbeeeebeeebebeeebeebbbbeeeeeeeeeebbbeebeeeeeeeebeebbeebeebbebbbeeebbbebebebeebbbbbbebbbeeee: Contact : b bb b b queryA 326:WHPA-TVCKIPPGCNLKIFNNQE----------------------------------FAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVT: 390 : * * ** * * * * * * * ********* * ** : 1mr1_B_1 103:RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDLRRLCILRMSFVKGWGPDYPRQSIK: 202 SecStr :S TTS EEE TT EEEEE HHHHHHHHHTT --------------------------------------- HHHHTTTEEEEESS STTSSS SGG: ExpBur :eeeeebebebeeebeeebbebebbbeebeeeee---------------------------------------eeebeebbbbebbbbebbbeeeeeeebe: Contact :b bbbbbbbbbb b bbb queryA 391:STPCWIELHLNGPLQWLDKVLTQM: 414 : ****** ** ** ** ** *: 1mr1_B_1 203:ETPCWIEIHLHRALQLLDEVLHTM: 226 SecStr :GSSSEEEEEEHHHHHHHHHHHTT : ExpBur :ebbbbbbbebebbeebbeebeeee: |