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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SMAD3_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [242 aa] | SMAD4 :SMAD4_HUMAN | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [221 aa] | SMAD4 :SMAD4_HUMAN | 241N(D) 246E 247T 357N(A) 358Q(A) 359G 360F(I) 363V 364Y(D) 367T(R) 371T(I) 390T(K) 397E 399H 401N(H) 404L 405Q 407L 408D 411L 412T(H) (identity: 52.4 %/50.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1g88_B_1 identity=50.3% |
queryA 229:PAFWCSISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYG: 325 :* **** * * ***** * * **** *** ***** **** * * * * *** ** * * * * **** * **** *: 1g88_B_1 36:PEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG: 135 SecStr : SEEEEEEEEETTEE S EEEETT SEEEEESS SSEEE TT TT HHHHHHHHHHTT EEEEEETTTEEEEEE SSS EEEE HHHHHHTT: ExpBur :beebbbbbbbbeeeebeeebebeeebeebbbbeeeeeeeeeebbbeebebeeeeeebeebbeebeebbebbbeeebbbebebebeebbbbbbebbbeeee: Contact : b bb queryA 326:WHPA-TVCKIPPGCNLKIFNNQE-----------------------------------FAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTV: 389 : * * ** * * * * * * * * * * ********* * * : 1g88_B_1 136:RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAXXXXXXXXXXXXAPAISLSAAAGI-GVDDLRRLCILRMSFVKGWGPDYPSQSI: 234 SecStr : TT EEEE TT EEEEE HHHHHHHHHHHHHHHHHHHHHHHHHH ------------ B TTT-THHHHGGGGEEEEESS STTSS SG: ExpBur :eeeeebbbbbeeebebebbbbebbbeebeeebeebeeebeeebeeee------------eeeeeeeeeeee-eeeebeebbbbebbbbebbbeeeebeeb: Contact : bbbb bb b b queryA 390:TSTPCWIELHLNGPLQWLDKVLTQM: 414 : ****** ** ** ** ** *: 1g88_B_1 235:KETPCWIEIHLHRALQLLDEVLHTM: 259 SecStr :GGSSSEEEEEEHHHHHHHHHHHTTS: ExpBur :eebbbbbbbebebbeebbeebeeee: Contact :b b b b bb bb bb |