Protein Model on 6atk_A_1_M_1 (TEMPLATE: 6atk )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [892 aa] Aminopeptidase N :AMPN_HUMAN
2 b M 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 292K 319N (identity: 100.0 %/99.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6atk_A_1 identity=99.1%
queryA        68:SKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLK: 167
                :****************************************************************************************************:
6atk_A_1       6:SKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLK: 105
SecStr          :  GGGSSS  SSEEEEEEEEEEEEE S  TTS  EEEEEEEEEEEESS  SEEEEE  SEEE  BTTBSEEEEESTT     EEEEEEETTTTEEEEEES:    
ExpBur          :eebeeeeebeebbebeebebebbbebeeeeeeebbbebebbbebbbeeebebbbbbbeebebeeeeeeebbbeebeebeeeebeebeebeebebbbbbbe:    

queryA       168:GSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVT: 267
                :****************************************************************************************************:
6atk_A_1     106:GSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVT: 205
SecStr          :S   TT EEEEEEEEEEE  SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B  STTS BEEEEEEEEETTSEEEESS BSS  EEETTEEEEEEE:    
ExpBur          :eebeeeeebbbbbebebebbeebbbbbbbebeeeeeebbbbbbbbbbbbbbbbbbbbbbbbbbbebebbbbbeeebebbbbbeeeeeeeebeeeeebbeb:    

queryA       268:EFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSL: 367
                :****************************************************************************************************:
6atk_A_1     206:EFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSL: 305
SecStr          :EB    SB GGG  EEEE  EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTT    SSEEEEEEESS SSSEE  TTEEEEEHHHH:    
ExpBur          :ebeebeebbbbbbbbbbbebeeeeeebeeebbbbbbbbbebbeebbbebbbebbbebbeebbebbebebebebbbbbbbbbbeeebbbbbbbbbbbbbbb:    
Contact         :                        b                          b                                                

queryA       368:LFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQ: 467
                :****************************************************************************************************:
6atk_A_1     306:LFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQ: 405
SecStr          :   TTTS HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHHSTTS HHHHHHHHTHHHHHHHHTSTT   SS  GGG  SHHH:    
ExpBur          :bbeeebbbeebebebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeeebeebebeebbbbebbbebbebbbbbbbbbbbbeeeebebeee:    

queryA       468:ISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEHFL: 567
                :****************************************************************************************************:
6atk_A_1     406:ISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEHFL: 505
SecStr          :HHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHHHHHT   SS HHHHHHHHHSS   EEEEEETTTTEEEEEE  :    
ExpBur          :bebbeeebbebbbbbbbbbbbebbeeebbeebbbebbeebeeebbeeeebbebbbebbeeeeeebeeebeebbbebbebbbbbbbebebeebebebebbb:    

queryA       568:LDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFN: 667
                :****************************************************************************************************:
6atk_A_1     506:LDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFN: 605
SecStr          :S TT    S  TTTT   EEE EEETTEE   EEE SSEEE GGG   TT  EEESGGG SS EEEE HHHHHHHHHHHHHHGGGS HHHHHHHHHHHHH:    
ExpBur          :ebeebeeebebeeebbbbbbbbbbbeeeebeebebeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbebbeebbeeebeebeebbbbbbbbbbbb:    

queryA       668:LASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPE: 767
                :****************************************************************************************************:
6atk_A_1     606:LASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPE: 705
SecStr          :HHHTTSS HHHHHHTTGGGGG   HHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHHHTT HH:    
ExpBur          :bbebeebebebbbebbebbeebeebbbbebbbebbeebebbbbeeebbebbeebbeebbeebbeebeeebeebeeebeebbebbbbebbbebbbebebee:    

queryA       768:CEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISIT: 867
                :****************************************************************************************************:
6atk_A_1     706:CEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISIT: 805
SecStr          :HHHHHHHHHHHHHHSTTS  S HHHHHHHHHHHHHHS HHHHHHHHHHHHT  SHHHHHHHHHHGGG   HHHHHHHHHHHT TTTS GGGHHHHHHHHH:    
ExpBur          :bbebbeebbeebbeeeeeeebebbbbebbbebbbbeebeeebebbbebbeeeebbbbbbbbbebbbbbeeeebbeebbeebeeeeebeebbbeebbbbbb:    

queryA       868:NNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967
                :***********************        *********************************************************************:
6atk_A_1     806:NNVIGQGLVWDFVQSNWKKLFNDXXXXXXXXSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 905
SecStr          :HSTTHHHHHHHHHHHHHHHHHH -------- HHHHHHHTT  SHHHHHHHHHHHHHHTTT  GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  :    
ExpBur          :ebeebbebbbebbeeebeeeeee--------eebbebbbebbbeeebbebbeebeeebeeeebeebeebbebbbbebebbeebbeebeeebbebbeebee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123