Protein Model on 5mj6_B_1_PA_1 (TEMPLATE: 5mj6 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) B 1 (B) polymer(polypeptide(L)) [866 aa] Leucyl-cystinyl aminopeptidase :LCAP_HUMAN
2 b PA 1 (B) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 128N (identity: 100.0 %/36.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5mj6_B_1 identity=36.5%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170
                :*   ***    *  *   * * **        * ** *        *  ** **   *       **       **       *         *     *:
5mj6_B_1       9:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSAVSSQEKQAEILEYAYHGQIAIVAPE-AL:  97
SecStr          :   SS  SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE  SEEEE-----EEEEEETTT  EEE EEEEEGGGTEEEEEEEE-EE:    
ExpBur          :eeeeebbebbebeebebebebebee-----eebebbbbbbbebeeebeebbbbbeebebe-----ebbbebeeeeeeeebebbeeeebbbbbbebee-eb:    
Contact         :                                                         b                                          

queryA       171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEF: 269
                :     *    *          ***   *  * *  *  * **     **  ******** ** * *  *     ****** **  *  *  *      **:
5mj6_B_1      98:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQDEF: 194
SecStr          : TT EEEEEEEEEEE BSSSSEEEEEEEE TT  EEEEEEEE TTTTGGGTS B  STT  BEEEEEEEEETTSEEEESS- EEE  B --TTSEEEEEE:    
ExpBur          :eeeeebebebebebebeeebebbbbbebebeeeeebebbbbbbbbbbbbebbbbbbbbebbbbbbbebbbeeebebbbbb-eeeeeeee--eeebbebbb:    

queryA       270:HTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLF: 369
                :    ****** **** *      *  ** *  * * *  *   *  ***  *   * **       *** * *    *** ********* * **  ** :
5mj6_B_1     195:SESVKMSTYLVAFIVGEMKNL-SQDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETLLY: 291
SecStr          :    SB GGG  EEEE  EEE-EEESSS EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHH      SEEEEEEESS SSSEE  TTEEEEEGGGT  :    
ExpBur          :eebeebbbbbbbbbbbbbeee-eeeeeebebbbbbbeebbebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbbbbbbbbbbbbb:    

queryA       370:DPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEINTP: 465
                :*   **      *   ***************  ************   **            * *    *        *  * * **** *   *     :
5mj6_B_1     292:DSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQSS: 383
SecStr          : TTT  HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH----- GGG THHHHHHHHHHHHHHHTSTT   SS---    SH:    
ExpBur          :eeebbbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebebbebbbebbebbbbebbbebb---bebeee:    

queryA       466:AQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--SQ: 563
                : ** * **  ** ** * * **   ******      ***   *       ***   * * *        *   *  **** ***  **      *   *:
5mj6_B_1     384:EQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNE-VTNQTLD----VKRMMKTWTLQKGFPLVTVQKKGKELFIQQ: 478
SecStr          :HHHHHTSSHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTEEE HHHHHHHHHH-TS TT  ----HHHHHHHHHHSSS EEEEEEEETTEEEEEE:    
ExpBur          :eebbbbbbebbeebbbbbbbbbbeebeeeebbebbbebbeebeeeebebeebbebbee-bbeeebe----beebbebbbebebbbbbebeeeeeebebeb:    

queryA       564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNE--WVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661
                :* * *             * *  *      **    *                 *  **  * *  *** * *    *     **           **  :
5mj6_B_1     479:ERFFLNXXXXXXXXXX-SYLWHIPLSYVTEGRNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRANL: 577
SecStr          :EE    -----------     EEEEEEEEETTS EEEEEEEE SSEEEEE SS EEEEEESGGG SSSEEEE HHHHHHHHHHHHH GGGS HHHHHHH:    
ExpBur          :ebbeee-----------eeebebbbbbbbbbeeeeeeeeeeebeeeeeebebeeebebbbbbbebbbbbbbbbeeebbebbbebbeeebeebebebbbbb:    

queryA       662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMDQY: 751
                :**  * **   ***   *      *  *    *   **       *     *  * *       **  *    *           *   **    *    :
5mj6_B_1     578:INNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE--: 671
SecStr          :HHHHHHHHTTTSS HHHHHHHGGGGGG   HHHHHHHHHHHH---HHHHHHHHHT H-HHHHHHHHHHHHHHHHHHHT  SS  S HHHHHHHHHHHH--:    
ExpBur          :bbbbbbbbbbeebebebbbebbebbeebeebbbbebbbebbe---bbbbbbbbeeee-ebbbebbbbbbebbeebbeebebeeeeebbebebbeebbe--:    

queryA       752:SEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNP: 851
                :        **      *      **  **              **            * *            *  *   *** *     *       ** :
5mj6_B_1     672:-------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSLNG: 762
SecStr          :-------HHHHTT TTHHHHHHHHHHHHHHTTT S   TTTHHHHH--HHHTTSHHHHHHHHHHHHH   HHHHHHHHHHHTT S HHHHHHHHHHHHHT:    
ExpBur          :-------bbbebebeebeeebeeebeebbeeeeeeebebbbbbbbb--bbbbeeeebbebbbebbeeeebbbbbbbbbebbbbbeeeebbeebbebbbee:    

queryA       852:DLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWV: 951
                :*  * *     *        *  * ****  ** **      **    *     *  ***   *     *     *  *    *    ***    ** * :
5mj6_B_1     763:DNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQWM: 860
SecStr          :SSS GGGHHHHHHHHHHSGGGHHHHHHHHHHTHHHHHHHS TT HHHHHHHHHHHTT  SHHHHHHHHHHHHTT HHHH--TSHHHHHHHHHHHHHHHHH:    
ExpBur          :eebebbbbbbbbebbbeeeebbebbbebbeeebeebeeebebbbebbbbbbebbbebbbeeeebeebeebbeeeeeebb--ebebbebbbeebeebbbbb:    

queryA       952:KENKEVVLQWF-TENSK: 967
                :  *      *  ** * :
5mj6_B_1     861:EKNLKSLTWWLRTETSQ: 877
SecStr          :HHHHHHHHHHTTTS  S:    
ExpBur          :eebbeebeeebeebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123