Protein Model on 5c97_B_1_U_1 (TEMPLATE: 5c97 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) B 1 (B) polymer(polypeptide(L)) [851 aa] Leucyl-cystinyl aminopeptidase :LCAP_HUMAN
2 b U 1 (B) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 651S(Y) 690R(N) (identity: 0.0 %/35.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5c97_B_1 identity=35.9%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEY--LVVHLKG: 168
                :*   ***    *  *   * * **        * ** *        *  ** **         **                  *  *             :
5c97_B_1      40:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHST--------GHNISRVTFMSAXXXXEKQAEILEYAYHGQIAIVAPE: 126
SecStr          :  SSS  SSEEEEEEEEEEEEETTT-----TEEE  EEEEEEESS EEEEEEE  --------S    EEEE   ---- EE EEEEETTTTEEEEEEEE:    
ExpBur          :eeeeebbebbebeebebebebebee-----eebbbebebbbebeeebeebbbbbe--------ebeeeebebbee----ebebebeeeeebbbbbbebee:    

queryA       169:SLVKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVT: 267
                : *     *    *          ***   *  * *  *  * **     **  ******** ** * *  *     ****** **  *  *  *      :
5c97_B_1     127:ALLAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQD: 223
SecStr          :EE TT EEEEEEE   B BSSSSEEEEEEEE SS  EEEEEEEE TTTTHHHHS B  SSSS BEEEEEEEEESSSEEEESS- EEEEEE --TTSEEEE:    
ExpBur          :bbeeeeebebbbebeeebeeeeebbbbbebebeeeeebebbbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbeeebebbbbb-eeeeeeee--eeebbeb:    

queryA       268:EFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSL: 367
                :**    ****** **** *      *  ** *  * * *  *   *  ***  *   * **       *** * *    *** ********* * **  *:
5c97_B_1     224:EFSESVKMSTYLVAFIVGEMKNL-SQDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETL: 320
SecStr          :EE    SB GGG  EEEE  EEE-EEESSS EEEEEE GGGTTSSH--HHHHHHHHHHHHHHHHS S    SEEEEEEES SS      TTEEEEEHHHH:    
ExpBur          :ebeebeebbbbbbbbbbbbbeee-eeeeeebebbbbbbeebbeebe--bbbebbbebbebbbebbeeebebebbbbbbbbbeebbebebbbbbbbebeeb:    

queryA       368:LFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEIN: 463
                :* *   **      *   ***************  ************   **            * *    *        *  * * **** *   *   :
5c97_B_1     321:LYDSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQ: 412
SecStr          :   TTT  SSTTHHHHHHHHHHHHHHHBTTTEEESSGGG HHHHHHHHHHHHHHHHHH-----SGGG THHHHHHHHHHHHTTTSSSS   SS---    :    
ExpBur          :bbeeeebbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbebbbee-----eeebbbebbbbebbbebbebbbbeebeebb---eebe:    

queryA       464:TPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--: 561
                :   ** * **  ** ** * * **   ******      ***   *       ***   * * *        *   *  **** ***  **      *  :
5c97_B_1     413:SSEQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNE-VTNQTLD----VKRMMKTWTLQKGFPLVTVQKKGKELFI: 507
SecStr          :SSSTTSGGG HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTEEE THHHHHHHSS- SSS SS---- TTSTTTSSSSSS EEEEEE SSS  EE:    
ExpBur          :eeeebeebeeeebbebbbbbbbbbbeeeeeeebeebbbebbeebbeeebebeebbebbbe-eeeeeee----ebebbebbbeebbbbbbbbeeebebbeb:    

queryA       562:SQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRA: 659
                : ** * *             * *  *            *               *    **  * *  *** * *    *     **           **:
5c97_B_1     508:QQERFFLNXXXXXXXXXT-SYLWHIPLSYVTEXXNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRA: 606
SecStr          :EEEE    --------- -     EE  EEE --    EEE  EE SSEEE   SS  S EEESGGG SSSEEEE HHHHHHHHHHHHH GGGS HHHHH:    
ExpBur          :ebeebebe---------e-eeebebbbbbbbe--eeeeeeeeebbeeeeeebebeeeeebbbbbbebbbbbbbbbeeebbebbbebbeeebeebebbbbb:    
Contact         :                                                                                           b        

queryA       660:QIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMD: 749
                :  **  * **   ***   *      *  *    *   **       *     *  * *       **  *    *           *   **    *  :
5c97_B_1     607:NLINNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE: 702
SecStr          :HHHHHHHHHHHHT S GGGTTTTGGGGGG   HHHHHHHHHHHH---HHHHHHHHHT H-HHHHHHHHHHHTTSHHHHHT  SS  S HHHHHHHHHHHH:    
ExpBur          :bbbbbbbbbbbeebbebbbbbebbebbeebeebbbbebbbebbe---ebbbbbbbeeee-ebbeebbeebbebbeebbeebebeeeeebbebebbeebbb:    
Contact         :                              b                                                                     

queryA       750:QYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTL: 849
                :          **      *      **  **              **            * *            *  *   *** *     *       *:
5c97_B_1     703:---------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSL: 791
SecStr          :---------HHHHTT TTHHHHHHHHHHHHHHTTT S   TTSTTTHH--HHHTTSHHHHHHHHHHHTT   TTGGGHHHHHHTT S HHHHHHHHHHHH:    
ExpBur          :---------bbbebebeebeeebeeebeebeeeeeeeebebbbbbbbb--bbbbeeeebbbbbeebbeeeeebebbeebbbbbbbbeeeebbeebbebbb:    

queryA       850:NPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIK: 949
                :* *  * *     *        *  * ****  ** **      **    *     *  ***   *     *     *  *    *    ***    ** :
5c97_B_1     792:NGDNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQ: 889
SecStr          :HTSSS GGGHHHHHHHHTTSHHHHHHHHHHHHHTHHHHHHHS TTSTHHHHHHHHHHTT   HHHHHHHHHHHHTT HHHH--TSHHHHHHHHHHHHHHH:    
ExpBur          :eeeebeeebbbebbebbbeeeebbeebbebbbeebeebeeebeeeeeebbebbebbbebbbeeebbeebeebbeeeeeebe--eeeebebbbbebebbee:    

queryA       950:WVKENKEVVLQWF: 962
                :*   *      * :
5c97_B_1     890:WMEKNLKSLTWWL: 902
SecStr          :HHHHHHHHHTTT :    
ExpBur          :bbbebbebbeebb:    


Input Residue Numbers for Focused Sites

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