Protein Model on 4z7i_B_1_J_1 (TEMPLATE: 4z7i )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) B 1 (B) polymer(polypeptide(L)) [852 aa] Leucyl-cystinyl aminopeptidase :LCAP_HUMAN
2 b J 1 (J) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 767E(N) (identity: 0.0 %/36.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4z7i_B_1 identity=36.3%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170
                :*   ***    *  *   * * **        * ** *        *  ** **   *       **       **       *         *     *:
4z7i_B_1      40:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSXXSSQEKQAEILEYAYHGQIAIVAPE-AL: 128
SecStr          :  SSS  TTEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS  SEEEEE  S EEE-----EE    --      B   EETTTTEEEEE TT-  :    
ExpBur          :eeeeebbebbebeebebbbbbebee-----eebebbbbbbbebeeeeeebbbbbeebeee-----ebebbe--eeeeeebeeeeeeeebbbbbebee-eb:    

queryA       171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEF: 269
                :     *    *          ***   *  * *  *  * **     **  ******** ** * *  *     ****** **  *  *  *      **:
4z7i_B_1     129:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQDEF: 225
SecStr          : SS EEEEEEEEEE  BSSS EEEEEE   TTS   EEEEEE TTTTHHHHS B  SSSS BEEEEEEE  TTS EEESS- EEEEE  --TTS  EEEE:    
ExpBur          :eebeebebebebebebbeeeebbbbbebeeeeeeeebbbbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbeeebebbbbb-eeeeeeee--eeebbbbeb:    

queryA       270:HTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLF: 369
                :    ****** **** *      *  ** *  * * *  *   *  ***  *   * **       *** * *    *** ********* * **  ** :
4z7i_B_1     226:SESVKMSTYLVAFIVGEMKNL-SQDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETLLY: 322
SecStr          :    SB GGG  EEEE     -EE SSS EEE    SS  SSTH--HHHHHHHHHHHHHHHHHT   S SEEEEEEES TT   EEETTEEEEEGGGT  :    
ExpBur          :eebeebbbbbbbbbbbbbeee-eeeeeebebbbebbeeebeebe--bbbebbbebbebbbebbebebebebbbbbbbbbbebeebbbbbbbbbbbebbbb:    

queryA       370:DPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEINTP: 465
                :*   **      *   ***************  ************   **            * *    *        *  * * **** *   *     :
4z7i_B_1     323:DSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQSS: 414
SecStr          : TTTS HHHHHHHHHHHHHHHHHHHBTTTBEESSGGGTHHHHHHHHHHHHHHHHHH-----SGGG THHHHHHHHHHHHHHHSSSS   SS---    SS:    
ExpBur          :eeeebbbebebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebbbbebbbebbeebbbebbeebb---eebeee:    

queryA       466:AQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--SQ: 563
                : ** * **  ** ** * * **   ******      ***   *       ***   *  *         *   *  **** ***  **      *   *:
4z7i_B_1     415:EQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNEVXNQ-----TLDVKRMMKTWTLQKGFPLVTVQKKGKELFIQQ: 509
SecStr          :HHHHHT SHHHHHHHHHHHHHHHHHS TTTTTTHHHHHHHHHTTSEE HHHHHHTT   -  -----    SSSSHHHHHSSS BEEEEEESSSEEEEE :    
ExpBur          :eebeebeeebbebbbbbbbbbbbeebeeeebeebbeebbeebeeeebebeebbebbbee-ee-----eeeebebbebbbeeebbbbbbbebeeeebebeb:    

queryA       564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661
                :* * *             * *  *      **    *               *    **  * *  *** * *    *     **           **  :
4z7i_B_1     510:ERFFLNX-XXXXXXXDTSYLWHIPLSYVTEGRXXXKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRANL: 608
SecStr          : B    ---------       B   EEE   --- B     B SSEEEEE SS  S EEESSSS SS EEEE HHHHHHHHHHHHH TTSS HHHHHHH:    
ExpBur          :eebebe---------eeeeebbbbbbbbbeee---ebeeeeebebeeeebebeeebebbbbbbebbbbbbbbbeeebbebbbebbeeebebbebbbbbbb:    

queryA       662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMDQY: 751
                :**  * **   ***   *      *  *    *   **       *     *  * *       **  *    *           *   **    *    :
4z7i_B_1     609:INNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE--: 702
SecStr          :HHHHHHHHHHTSS HHHHHHHHTTGGG   HHHHHHHHTHHH---HHHHHHHHTT H-HHHHHHHHHHHHHTHHHHHH  SSS S HHHHHHHHHHHH--:    
ExpBur          :bbbbbbbbbbeebebebbbebbebbeebeebbbbebbeebbe---bbbbbbbbeeee-ebbeebbeebbebbeebbeeeebeeeeebbebebbebbbe--:    
Contact         :                                                                            b b                     

queryA       752:SEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNP: 851
                :        **      *      **  **              **            * *            *  *   *** *     *       ** :
4z7i_B_1     703:-------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSLNG: 793
SecStr          :-------HHHHTT TTTTHHHHHHHHHHHHHTS S   TTTHHHHH--HHHTTSHHHHHHHHHHHHS   HHHHHHHHHHHTT S HHHHHHHHHHHHHT:    
ExpBur          :-------bbbebebeebbeebeeebeebbeeebeeebbbbbbbbbb--bbbbeeeebbeebbeebeeeeebeebebbbebbbbbeeeebbeebbebbbee:    
Contact         :               b                                                                                    

queryA       852:DLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWV: 951
                :*  * *     *        *  * ****  ** **      **    *     *  ***   *     *     *  *    *    ***    ** * :
4z7i_B_1     794:DNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQWM: 891
SecStr          :SSS GGGHHHHHHHHTTSHHHHHHHHHHHHHTHHHHHHHS TT HHHHHHHHHHSSS   HHHHHHHHHHHHTT HHHH--TSSHHHHHHHHHHHHHHHH:    
ExpBur          :eebebebbbebbebbbeeeebbeebbebbeeebeebeeebeeeeebbeebbebbbebbbeeeebeebeebbeeeeeebb--eeebbebbbbebebbbbbb:    

queryA       952:KENKEVVLQWF: 962
                :  *      * :
4z7i_B_1     892:EKNLKSLTWWL: 902
SecStr          :HHHHHHHHT  :    
ExpBur          :eebbebbeebb:    


Input Residue Numbers for Focused Sites

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