Protein Model on 4mkt_A_1_C_1 (TEMPLATE: 4mkt )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [608 aa] Leukotriene A-4 hydrolase :LKHA4_HUMAN
2 b C 1 (A) non-polymer(28T) 1-{4-oxo-4-[(2S)-pyrrolidin-2-yl]butanoyl}-L-proline 213Q 351A(Y) 352G 353A(G) 354M 355E 388H 389E 392H 411E 472F(Y) 477Y (identity: 75.0 %/30.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4mkt_A_1 identity=30.1%
queryA       210:TQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAI: 309
                : * **   *   ** * *  *         ** * **      *  ** ****      *        ** *  *        *     *   *      :
4mkt_A_1     134:SQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDG-ETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALE--SRQIGPRTLV--WSEKEQV: 228
SecStr          :E  TTTTGGGTS B  STT  EEEEEEEEEETTSEEEESSEEEE-EEEETTEEEEEEEEEEEEEEE GGG  EEEESEE--EEEEETTEEE--EEEHHHH:    
ExpBur          :bbbbbbbbbbbbbbbbbbebbbebbbebbbbeebbbbbbbeeee-eeebeeeeebebbebebebebbbbbbbbbbbebe--eeeebebbbb--bbbeeeb:    
Contact         :   b                                                                                                

queryA       310:AAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLP-DFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLW: 408
                :      *    *   *   *     **     *   **  *  * ***  * *     **                *****  * * *****   *   *:
4mkt_A_1     229:EKSA--YEFSETESMLKI-AEDLGGPYVWGQYDLLVLPPSFPYGGMENPCL-TFVTPTLL--------AGDKSLSNVIAHEISHSWTGNLVTNKTWDHFW: 316
SecStr          :HHHH--HHTTTHHHHHHH-HHHHH    SS  EEEE  TT SSSEE  TTE-EEE GGG -------- SSSTTTHHHHHHHHTTTBTTTEEESSGGGHH:    
ExpBur          :eebb--ebbebbbebbeb-beebbbebebeebbbbbbbebbbbbbbbbbbb-bbbbbbbb--------beeebbbebbbbbbbbbbbbbbbbbebbbbbb:    
Contact         :                                          bbbbb                                bb  b                

queryA       409:LNEGFASYVE--YLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFL-SEDVFKQGLASYLH: 505
                :****   * *    *    *       *           *      **         *            * **   *  *   *     *   *  *  :
4mkt_A_1     317:LNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQN--SVKTFGETHPFTKLVVDL-TDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVE: 413
SecStr          :HHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHH--HHHHH TT GGGSSS   -TT  HHHH  SHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbbbbbbbbeeeeeebbbbebbebbbebee--bbeeeeeeeebbebbeeb-eeebbbebebebbbbbbbbbbbbbbeebebeeebbebbeebbe:    
Contact         :  b                                                              b    b                             

queryA       506:TFAYQN: 511
                : * *  :
4mkt_A_1     414:KFSYKS: 419
SecStr          :HHTTEE:    
ExpBur          :ebbeeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123