Protein Model on 3q43_A_1_H_1 (TEMPLATE: 3q43 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [889 aa] M1 family aminopeptidase :AMP1_PLAFQ
2 b H 1 (A) non-polymer(MG) MAGNESIUM ION 439D(H) (identity: 0.0 %/28.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3q43_A_1 identity=28.5%
queryA       134:GHRVVLRGVG-GSQPPDIDKTELVEPTEYL----VVHLKGSLVKDSQYEMDSE--FEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDE: 226
                :*   *  ***       *    ***  **             *  *     **     *    * * * *        *     *  *   *      * :
3q43_A_1      47:GEDLVFDGVGLKINEISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKS--------KNIIVSQCEATGFRRITFFIDR: 138
SecStr          :S  EEEE  S EEEEEEETTEE  BTTTEEE SSEEEE GGGS SSSEEEEEEEEE GGG TT SEEEEE--------TTEEEEE TTTTGGGTS B  S:    
ExpBur          :eeebebbbeebeeeebbbeeeebeeeebbeeeeeebbbeeeebeeeebebbbebbbebeebebbbbbbeb--------eebbbbbbbbebbbebbbbbbe:    

queryA       227:PAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNW-NVTEFHTTPKMSTYLLAFIVSEFD-----YVEKQASNGVLIRIWARPSAIAAGHGDYALNV: 320
                :* * *    *    *        *  *      * *       *   *    ** *            *  *     *                  **  :
3q43_A_1     139:PDMMAKYDVTVTADKEKYPV--LLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQ--WALEC: 234
SecStr          :TT  EEEEEEEEEETTT  E--EEESSEEEEEEEETTTEEEEEEEEEEEE GGG  EEEE EEEEEEEEE SSS  EEEEEEEEEGGGGGGGH--HHHHH:    
ExpBur          :bbbbbebbbbbbbeeeebee--bbbbeeeeeeeeeeeebbbbebebeeebbbbbbbbbbbebeeeebebebeeeeeebebebbbeeebeebbe--bbbeb:    

queryA       321:TGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYL: 420
                :      *        * *         *** ***** **     ****     *      *  **  **  **  ** **   *  * * **     * *:
3q43_A_1     235:LKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENL: 334
SecStr          :HHHHHHHHHHHH     SSEEEEEEES  SSSEE  TTEEEEEGGGT   TTTS THHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHH:    
ExpBur          :beebbebbbebbebbbeeeebbbbbbbbbbebbbbbbbbbbbbbebbbbbbeebbbebbeebbebbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbb:    

queryA       421:GADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYL: 504
                :       *        *  *     *  *  * *** *                  * **  * **    * *   * *   * :
3q43_A_1     335:FSEEMTKTVTTR----LSHVDLLRSVQFLEDSSPLSHPIRP-ESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYI: 413
SecStr          :HHHHHH  THHH----HHHHHHHHHHHHHHHTSTT   SS -SEES GGGG  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbeeebebebbb----bebbeebbbbbbbbbebebbbbbbb-eebebbbbbebbbbeebbbbbbbbbbbbbeeeebeebbeebb:    
Contact         :                  b                                                                                 


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