Protein Model on 3ebi_A_1_C_1 (TEMPLATE: 3ebi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [889 aa] M1 family aminopeptidase :AMP1_PLAFQ
2 b C 1 (A) non-polymer(BEY) (2S)-3-[(R)-[(1S)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]-2-benzylpropanoic acid 211Q 213Q(E) 214A 351A(V) 352G 353A 354M 355E 381R 384T 385V 388H 389E 392H 410N(K) 411E 469S(E) 472F(Y) 477Y (identity: 73.7 %/28.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3ebi_A_1 identity=28.5%
queryA       134:GHRVVLRGVG-GSQPPDIDKTELVEPTEYL----VVHLKGSLVKDSQYEMDSE--FEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDE: 226
                :*   *  ***       *    ***  **             *  *     **     *    * * * *        *     *  *   *      * :
3ebi_A_1      47:GEDLVFDGVGLKINEISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKS--------KNIIVSQCEATGFRRITFFIDR: 138
SecStr          :S  EEEE SS EEEEEEETTEE  BTTTEEE SSEEEE GGGS SSSEEEEEEEEE GGG TT SEEEEE--------TTEEEEE TTTTGGGTS B  S:    
ExpBur          :eeebebbbeebeeeebbbeeeebeeeebbebeeeebbbeeeebeeeebbbbbebbbebeeeebbbbbbeb--------eebbbbbbbbbbbbebbbbbbe:    
Contact         :                                                                                    b bb            

queryA       227:PAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNW-NVTEFHTTPKMSTYLLAFIVSEFD-----YVEKQASNGVLIRIWARPSAIAAGHGDYALNV: 320
                :* * *    *    *        *  *      * *       *   *    ** *            *  *     *                  **  :
3ebi_A_1     139:PDMMAKYDVTVTADKEKYPV--LLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQ--WALEC: 234
SecStr          :TT  EEEEEEEEEETTT  E--EEESSEEEEEEEETTTEEEEEEEEEEEE GGG  EEEE EEEEEEEEE SSS  EEEEEEEEEGGGGGG H--HHHHH:    
ExpBur          :bbbbbebbbbbbbeeeebee--bbbbeeeeeeeeeeeebbbbebebeeebbbbbbbbbbbebeeeebebebeeeeeebebbbbbeeebeebbe--bbbeb:    

queryA       321:TGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYL: 420
                :      *        * *         *** ***** **     ****     *      *  **  **  **  ** **   *  * * **     * *:
3ebi_A_1     235:LKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENL: 334
SecStr          :HHHHHHHHHHHS     SSEEEEEEES  SSSEE  TTEEEEEGGGT   TTTS THHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHH:    
ExpBur          :beebbebbbebbebbbeeeebbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeebbbebbeebbebbbbbbbbbbbbbebbbebbbbbbbbbbbbbbbbbb:    
Contact         :                              bbbbb                         b  bb  bb  b                 bb         

queryA       421:GADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYL: 504
                :       *        *  *     *  *  * *** *                  * **  * **    * *   * *   * :
3ebi_A_1     335:FSEEMTKTVTTR----LSHVDLLRSVQFLEDSSPLSHPIRP-ESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYI: 413
SecStr          :HHHHHH  THHH----HHHHHHHHHHHHHHHHSTT   SS -SEES GGGG  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbeeebebebbb----bebbeebbbbbbbbbebebbbbbbb-eebebbbbbebbbbebbbbbbbbbbbebbeeeebeebbeebb:    
Contact         :                                                b  b    b                                           


Input Residue Numbers for Focused Sites

ex) 2,15,123