#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6nus_A_1_D_1

Protein Model on 6nus_A_1_D_1 (TEMPLATE: 6nus )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [715 aa] NSP12 :R1AB_CVHSA
2 b D 1 (A) non-polymer(ZN) ZINC ION 487C 642H 645C 646C (identity: 100.0 %/86.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6nus_A_1 identity=86.3%
queryA       118:RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWY: 217
                :******************************************************************* ************ *******************:
6nus_A_1     120:RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQSLLKTVQFCDAMRDAGIVGVLTLDNQDLNGNWY: 219
SecStr          :   SSBHHHHHHHHHT  SSS HHHHHHHHHTTSS GGGGGSTTTT SSSSTTHHHHHGGGHHHHHHHHHHHHHHHHHHHHTTEEEE  TTSBBTT  B :    
ExpBur          :eebebbbeebbebbbebeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbeebbeebeebeeebbebebebeebbbebebe:    

queryA       218:DFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLF: 317
                :    * *  ** *** ****************** **** * ** ** *************** ***************** ******************:
6nus_A_1     220:XXXXFVQVAPGCGVPIVDSYYSLLMPILTLTRALAAESHMDADLAKPLIKWDLLKYDFTEERLCLFDRYFKYWDQTYHPNCINCLDDRCILHCANFNVLF: 319
SecStr          :---- EE  TT  EEE HHHHHHHGGGTTTTTTTGGGGBTTS TTS B    TT    HHHHHHHHHHHSTT  S   SSGGG SSHHHHHHHHHHHHHH:    
ExpBur          :----eeeeeeeebebebbbbbbebbbbbbbbebbebbebeebeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebeebbbbbbbbbbbbbb:    

queryA       318:STVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNK: 417
                :**************************************************************************************         *****:
6nus_A_1     320:STVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNXXXXXXXXXGNFNK: 419
SecStr          :GGGS TTSSEEEEEEEEETTEEEEEEEEEEETTTEEEE S    SBSS  HHHHHHHHT THHHHTTSB    TT SS EEEES  ---------    H:    
ExpBur          :bebbbeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeeeeebbbebbbbebbeeeeeeebeeeeeebebbeee---------eeeee:    

queryA       418:DFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD: 517
                :*********                             **************************************************************:
6nus_A_1     420:DFYDFAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD: 519
SecStr          :HHHHHHHT ----------------------------- TT       HHHHHHHHHHHHHTT SS      GGG     TTSB  TTGGGT BTHHHHT:    
ExpBur          :ebeebbeee-----------------------------eebbeebbbbbbbbbbbbbbbeebbeebebbebebeebebeeeeeebbbbbeeeeebeebbe:    
Contact         :                                                                     b                              

queryA       518:SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGW: 617
                :*************************                 *************************************************** ******:
6nus_A_1     520:SMSYEDQDALFAYTKRNVIPTITQMXXXXXXXXXXXXXXXXXVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVETPHLMGW: 619
SecStr          :TS HHHHHHHHHHTTTS    EEE -----------------  HHHHHHHHHHHHHHHHHHHT  SSSB  S  STTTHHHHHHHHHHTT SSEEEEE :    
ExpBur          :ebeeeebeebbeebeebbbbbbbee-----------------bbbbbbbbbbbbbbebbebbbeeeebbbbbebebeebbbbebbeebbeebeeeebbbb:    

queryA       618:DYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD: 717
                :************************* *** **********************************************************************:
6nus_A_1     620:DYPKCDRAMPNMLRIMASLVLARKHNTCCNLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD: 719
SecStr          :  TTTTTT  HHHHHHHHHHHGGG SSS  HHHHHHHHHHHHHHHTS EEEETTEEEE  S   TTSSSHHHHHHHHHHHHHHHHHHHHHHTS GGG   :    
ExpBur          :ebeebeebbbbbbbbbbbbbbbeebeeebeeeebbbbbbbbbbbbbbbbbbbeebbbebebbbbebbebbebbbbbbbbbbbbbbbbbbbbeeeeeebee:    
Contact         :                        b  bb                                                                       

queryA       718:KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHT: 817
                :*********************  ** ********************** ** ** *********** *********************************:
6nus_A_1     720:KYVRNLQHRLYECLYRNRDVDHEFVDEFYAYLRKHFSMMILSDDAVVCYNSNYAAQGLVASIKNFKAVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHT: 819
SecStr          :HHHHHHHHHHHTTTSS  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHTTTSS  HHHHHHHHHHHTS    GGG EEE  TTS  S BTTBEE:    
ExpBur          :eebeebbeebeebbbeeeeeeeebbeebbebbeebbbbbbeebebbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebbb:    

queryA       818:MLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWE: 917
                :***********************             **************************************              ************:
6nus_A_1     820:MLVKQGDDYVYLPYPDPSRILGAXXXXXXXXXXXXXLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLXXXXXXXXXXXXXXMLTNDNTSRYWE: 919
SecStr          :EEEE SSSEEEEEE  HHHHHH ------------- HHHHHHHHHHHHGGGGGSS HHHHHHHHHHHHHHHH --------------   SHHHHGGG :    
ExpBur          :bebeeeeeebbbbbbebeebeee-------------eeeeebbebbbebbbbeeeeeeeebebbebbbebbeee--------------ebbeeebeeebe:    

queryA       918:P: 918
                :*:
6nus_A_1     920:P: 920
SecStr          : :    
ExpBur          :e:    


Input Residue Numbers for Focused Sites

ex) 2,15,123