#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [915 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | C 1 (B) | polymer(polypeptide(L)) [126 aa] | Non-structural protein 8 :R1AB_SARS2 | 4661D 4662L 4663L 4664K 4665Y 4715P 4716T 4718F 4720P 4721L 4722V 4723R 4724K 4731P 4732F 4733V 4736T 4760F 4763L 4764L 4767A 4770P 4771A 4772M 4773H 4774A 4775A 4776S 4778N 4779L 4780L 4781L 4782D 4783K 4784R 4788F 4790V 4794T 4795N 4799F 4839N 4897P 4901W 4906L 4907Y 4909D 4910S 4912S 4913Y 4914E 5058M (identity: 100.0 %/98.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7btf_A_1 identity=98.5% |
queryA 4396:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK:4495 :****************************************************************************************************: 7btf_A_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHHHHTTS S EE SSS S EEEEEESSS EEEEEE EEEEE TTS EEEEEEEEEE HHHHHHHHHHHHHHTT TTB EEEEE: ExpBur :eeebbeebbeeebeebbeebeeeeebeeebbebeeeeebbbbbebebeebbbbbbeeeeeeeeebbbbbbebeeeebeebeebbeebeebebbbebebbe: queryA 4496:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG:4595 :****************************************************************************************************: 7btf_A_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr :EESSSSEEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTSS TTGGGSTTTT SSSSTTHHHHHTTSHHHHHHHHHHHHHHHHHHHTTTEEE: ExpBur :eeeeeeebbbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbebbbebbeebeebbbeb: queryA 4596:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD:4695 :****************************************************************************************************: 7btf_A_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E GGGBBTTS B SS EE STT EE HHHHHHHTHHHHHTTGGGGGGBTTS TTS B TT HHHHHHHHHHHSTT S SSGGG SS: ExpBur :ebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebee: Contact : bbbbb queryA 4696:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN:4795 :****************************************************************************************************: 7btf_A_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :HHHHHHHHHHHHHHGGGS GGGSB EE EETTEE EE EEEETTTEEEE S SSB HHHHHHHHH HHHHHHSSEE TT SS EEEESSS: ExpBur :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeebebbbbbbbebbbbbebeeeeeebeeeeeeeebbbebbbbebeeeeeebebeebebebebbeee: Contact : bb b bbbbb bbb b b bb b bbbbbbb bbbbbbb b b bb queryA 4796:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG:4895 :****************************************************************************************************: 7btf_A_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B EE HHHHHHHHHHTTT SS SS B B GGGHHHHHGGGGG HHHHHHHHHHHHHHT SS TTS TTS : ExpBur :eeeeeebeeebebeebeebbeeeebbeeeeebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbeebbeebebbebebeebeeeeeeeebb: Contact : b b queryA 4896:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK:4995 :****************************************************************************************************: 7btf_A_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :BTTTTT HHHHHHHS HHHHHHHHHHHTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHHT SSSB S STTTHHHHHHH: ExpBur :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeeebeeeebebebbbbbbbbbbbbbbbbebbeebeeeeeebbbbebebbbbbbbebbe: Contact : b b bb bb bbb queryA 4996:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN:5095 :****************************************************************************************************: 7btf_A_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHTSS SSEEEEE TTHHHH HHHHHHHHHHHHTT SSS HHHHHHHHHHHHHHHTS EEEETTEEEE S TT SSHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbebeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbb: Contact : b queryA 5096:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET:5195 :****************************************************************************************************: 7btf_A_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHTS TTT HHHHHHHHHHHHHHHS S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTS EEES: ExpBur :bbbbbbbbbeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebe: queryA 5196:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY:5295 :********************************************************************************************* : 7btf_A_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXX: 903 SecStr : TTS S BTTBEEEEEESSS EEEEEE HHHHHHHHHEE SSSSS SHHHHHHHHHHHHHTSGGGG SSHHHHHHHHHHHHHHHHHHHHH -------: ExpBur :ebeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeebeeeeeebbeebbebbbebbbbeebeeeebbebbebbbebbeebeeeee-------: queryA 5296:SVMLTNDNTSRYWEPEFYEAMYTPHTVLQ:5324 : **********************: 7btf_A_1 904:XXXXXXXNTSRYWEPEFYEAMYTPHTVLQ: 932 SecStr :------- S TTSTHHHHGGG TT : ExpBur :-------eeeeeeeeebbebbbbeeeeee: |