#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [853 aa] | nsp12 :R1AB_SARS2 | |
2 | b | G 1 (T) | polymer(polyribonucleotide) | RNA product | 4892K 4893S 4899N 4933Q 4935N 4937K 4949V 4951G 4961R 4969K 4972A 4982G 4984S 4986F 4987Y 5074S 5075G 5076D 5077A 5081Y 5252V 5253S 5306R 5307Y 5312F 5316M (identity: 100.0 %/94.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6yyt_A_1 identity=94.9% |
queryA 4423:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYA:4522 :******************** ********************* *************: 6yyt_A_1 34:VYRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXXXXXXXXXFSNYQHEETIYNLLKDCPAVAXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYA: 133 SecStr : EEEEEEESSS EEEEEEE -------------------------- HHHHHHHHHHHHTSS TTB -------------------- SSBHHHHHHH: ExpBur :eeebbbeeeeebbbbbebee--------------------------eeeeeeeeebeeebeebebbe--------------------eebebbbbbbbbb: queryA 4523:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG:4622 :****************************************************************************************************: 6yyt_A_1 134:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 233 SecStr :HHS SS HHHHHHHHHTTSS GGGGGSTTSS SSS TTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEEE GGGBBSSS B S EE STT : ExpBur :bbbbeeeebeebeebbeebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbbbbbebbebbeebbbebbbbbbbbbbebbbebbeebeeeeeeeb: queryA 4623:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV:4722 :****************************************************************************************************: 6yyt_A_1 234:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 333 SecStr : EE HHHHHHHHHHHHHHTGGGGGGBTTS SSS B TT HHHHHHHHHHHSTT S SSGGG SSHHHHHHHHHHHHHHTTTS TTT EEEE: ExpBur :ebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbebebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebe: queryA 4723:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK:4822 :****************************************************************************************************: 6yyt_A_1 334:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 433 SecStr :EEEEETTEEEEEEEEEEETTTEEEE S SB HHHHHHHHH HHHHHHHSEE SSSSS EEEESSSS HHHHHHHHHTT S : ExpBur :eebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebbebbbbbbbbebeeeeeebebeebebebbbbeeeeeeeeebeeeeebeebeebbeeeebee: queryA 4823:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY:4922 :****************************************************************************************************: 6yyt_A_1 434:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 533 SecStr :TT S B GGGHHHHHGGGGG HHHHHHHHHHHHGGGSSS GGG S SSSB TTGGGT BHHHHHHHS HHHHHHHHHH: ExpBur :eebebebebebeeeeeebbbebbeebebbbebbbbbbbbbbbbbbbbbbbeebeebebebeebeeeebeeebbbbbeeeeebeebbeebeeeebeebbeb: Contact : bb b queryA 4923:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML:5022 :****************************************************************************************************: 6yyt_A_1 534:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 633 SecStr :HTTS EEEEEE BSSSS EEEE HHHHHHHHHHHHHHHHHHHT SSSB TT STTTHHHHHHHHHTSS SSEEEEE TTHHHH HHH: ExpBur :bbebbbbbbbbbebeeebeeeeeeebebebbbbbbbbbebbbbebbebbeeeeebbbbbeeebbebbbeebbeebbeebeeeebbbbebeebebbbbbbb: Contact : b b b b b b b b b b bb queryA 5023:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC:5122 :****************************************************************************************************: 6yyt_A_1 634:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 733 SecStr :HHHHHHHHHTT SSSS HHHHHHHHHHHHHHTTS EEEETTEEEE S SSSTTSHHHHHHHHHHHHHHHHHHHHHTS SSS HHHHHHHHHHHHH: ExpBur :bbbbbbbbbebbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbbbbbbbbbbebeebeeeebbebbbebbeb: Contact : bbbb b queryA 5123:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP:5222 :****************************************************************************************************: 6yyt_A_1 734:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 833 SecStr :HHT S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHTTSS HHHHHHHHHHTT TTS EEES TTT S SSS EEEEEESSS EEEEE: ExpBur :bbeeeeeeeebbeebeebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebeebeebbeebeebbbbebebeeeebbbb: queryA 5223:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT:5321 :***************************************************************************************************: 6yyt_A_1 834:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 932 SecStr :E HHHHHHHHH SSSHHHHSS HHHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS STTGGGGGGGSHHHHHGGG TT : ExpBur :bbebbebbbbbbbbeeeeebeeeebbeebbebbbebbbbeebeeeebbebbebbbebbeebbeebbeeeeeeeeeeeeeeebeeebeeeebeebbeeee: Contact : bb bb b b |