#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 5s6y_A_3_D_3

Protein Model on 5s6y_A_3_D_3 (TEMPLATE: 5s6y )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 3 (A) polymer(polypeptide(L)) [348 aa] Uridylate-specific endoribonuclease :R1AB_SARS2
2 b D 3 (A) non-polymer(WUJ) N-[(furan-2-yl)methyl]urea 6604Q 6605P 6606S 6607V 6640Q 6641L 6642P 6643E (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5s6y_A_3 identity=100.0%
queryA      6453:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG:6552
                :****************************************************************************************************:
5s6y_A_3       4:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG: 103
SecStr          : HHHHHHHHHHHSS  S      EEEETTEEEEEETTEEEEEEE  SSS HHHHHHHHHTB  S B  HHHHHHTT  EESSSB EETTTTEESSSSEES:    
ExpBur          :eeebbbebbeeeebbeeeeeebebeeeeebbebeeeeeeeebbebebeeebebbbbbbbbbbeebbbbbbbbeebebebbbebbbbbeeeebbbbeebbe:    

queryA      6553:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL:6652
                :****************************************************************************************************:
5s6y_A_3     104:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL: 203
SecStr          :S TTTEEESSTTSGGGTTS EEEETTSTTHHHHHHH SSEEEEESS  TT   EE  SEEEETTEEEE SSS    EEEEESSSSEE     B B    S:    
ExpBur          :bbeebeebeebeeeebeeebbbbbebeeebeeebeebebbbbbbeeebeebeebebbebbbeeeeeeeeeeeebebbbbbbeeeeeeebeeeebbbbbeb:    
Contact         :                                                   bbbb                                bbbb         

queryA      6653:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD:6752
                :****************************************************************************************************:
5s6y_A_3     204:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD: 303
SecStr          :TT    SHHHHHHHHS HHHHHHHTT TTTTHHHHTT B SSSB B   BHHHHHHHHHHS EEEE SS S  SEEEEEEEETTT  EEEEEEEE B HH:    
ExpBur          :eebeeebebbebbeebeeeebbeebebeebbbeebbbbebeeeebbbbbbbbbbbbeeeebebeeeeeeeebebbbebebebeeeebebeebbbbbbbbe:    

queryA      6753:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ:6798
                :**********************************************:
5s6y_A_3     304:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ: 349
SecStr          :HHHHHHHTS   SSEEEEEEEETTEEEEEEEEEETTEEEEEEE   :    
ExpBur          :ebbebbeeeebeeeeeebebbbbbeebbbbbebeeeebebbebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123