[pdbjlvh2]Protein Model on 5rm2_B_1_I

#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 5rm2_B_1_I_1

Protein Model on 5rm2_B_1_I_1 (TEMPLATE: 5rm2 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	B 1 (B)	polymer(polypeptide(L)) [585 aa]	Helicase :R1AB_SARS2
2	b		I 1 (B)	non-polymer(UXG)	1-(diphenylmethyl)azetidin-3-ol	5740T 5875E 5876T 5877A 5880C 5881N (identity: 100.0 %/98.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5rm2_B_1 identity=98.8%

queryA      5326:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD:5425
                :****************************************************************************************************:
5rm2_B_1       2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101
SecStr          : EE SSS  EES EESSSTT  B  HHHHHHHHHHSS   EESSSBSS  STT     GGGEEEETTEEEETTT  SS EESEETTEE  S  SS    S:    
ExpBur          :eeebbeeebebbbebeebeeebebbbbbbeebbeebebeebbbeeebebebeebeeeebeebebbeeebebeeeeeeeeeebbeeeebebeebeeeebee:    

queryA      5426:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE:5525
                :****************************************************************************************************:
5rm2_B_1     102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201
SecStr          : THHHHHHHH  S BHHHHHHHTTS HHHHHHHHHHHHHHHHHHTTTS  EEEEE  SSSEEEEEE SSS     STT  EEEEEE SSSEEEEEEEEEE:    
ExpBur          :ebeebbebbebebbebebbebbbebeeebbbbbbbbbebebbeeeeebbebebeeeeeebebebebeeeeeebebbeebebbbbbeeeeeeeebeebebe:    

queryA      5526:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS:5625
                :**    **********************************************************************************************:
5rm2_B_1     202:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301
SecStr          :E ---- EEEEESS     TT EEEE         S SS    B SS  S    S   TTTGGGHHHHHHHHHBSEEEEE  TTS HHHHHHHHHHHSTT:    
ExpBur          :ee----ebebeeeeeeebeeebbbebbeeebeebebebbbeeeeeeeeeebeeeeeeeeebeebeeebeebbebbbbbbbbbbbbebebbbbbbbebbee:    

queryA      5626:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD:5725
                :***********************************   **************************************************************:
5rm2_B_1     302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401
SecStr          :  EEEEESSHHHHHHHHHHHHTTS GGGEEE    ---     SSEES TTSSEEEEEGGG  SEEEEEEEE  GGG  HHHHHHHHHHEEEEEEEEEE :    
ExpBur          :bbbbbbbeeeebbbebbebbeebbeeeebbbbeee---eebbeebeeeeeebbbbbbbbebbbebebebbbbbebbebebbbbbbbbeebebebbbbbbb:    

queryA      5726:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT:5825
                :****************************************************************************************************:
5rm2_B_1     402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501
SecStr          :TTS     TT  BS   GGGS HHHHHHHHT  SEE  EESSS HHHHHHHHHHHSTT  EESS   S EEEEE     EE SS EE HHHHHHHHHHHH:    
ExpBur          :bbbbbbebebbeeeebebebbbbbbebbeeeeeebebeebebbbbbbbebbbebbbeeebeeeeeeeeebbbbeeeeeeeeeeebbbbeebbbbbeebbe:    
Contact         :              b                                                                                     

queryA      5826:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP:5917
                :********************************************************************************************:
5rm2_B_1     502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593
SecStr          :H GGGGG EEEES HHHHHHHHHHH   EEEHHHHTT  EEEEEEE  S SHHHH HHHHHHHHTTEEEEEEEEES HHHHHH  SEE    :    
ExpBur          :eeeebeebbbbbbbbbbbebbeeebebeeebbeebbeeebebbbbbbbbeeeebebebbbbbbbbbbeebbbbbbbbeebbeebebeeeeee:    
Contact         :                                                 bbb  bb

Protein Model on 5rm2_B_1_I_1 (TEMPLATE: 5rm2 )

Input Residue Numbers for Focused Sites