Protein Model on 6ydx_B_1_DA_1 (TEMPLATE: 6ydx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) B 1 (B) polymer(polypeptide(L)) [853 aa] Leucyl-cystinyl aminopeptidase :LCAP_HUMAN
2 b DA 1 (B) non-polymer(EDO) 1,2-ETHANEDIOL 249M 270H(S) 271T(E) (identity: 33.3 %/36.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6ydx_B_1 identity=36.3%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170
                :*   ***    *  *   * * **        * ** *        *  ** **   *       **       **       *         *     *:
6ydx_B_1      40:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSAVSSQEKQAEILEYAYHGQIAIVAPE-AL: 128
SecStr          :   SS  SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE  SEEEE-----EEEEE STTT  EE  EEE  SSSEEEEEEEE-EE:    
ExpBur          :eeeeebbebbebeebbbebebebee-----eebebebebbbebeeebeebbbbbeebebe-----ebbbbeeeeeeeeebebeeeeeebbbbbebee-eb:    

queryA       171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEF: 269
                :     *    *          ***   *  * *  *  * **     **  ******** ** * *  *     ****** **  *  *  *      **:
6ydx_B_1     129:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQDEF: 225
SecStr          : TT EEEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTHHHHS B   TT  BEEEEEEEEESS EEE SS- EEEEE T--TSSEEEEEE:    
ExpBur          :eeeeebebbbebebebeebbbbbbbbebebeeeeebebbbbbbbbbbbbebbbbbbbbebbbbbebebbbeeebebbbbb-eeeeeeee--eeebbbbeb:    
Contact         :                                                                               b                    

queryA       270:HTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLF: 369
                :    ****** **** *      *  ** *  * * *  *   *  ***  *   * **       *** * *    *** ********* * **  ** :
6ydx_B_1     226:SESVKMSTYLVAFIVGEMKNLS-QDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETLLY: 322
SecStr          :EE  SB GGG   EEE  EEEE-EEETTEEEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHS    SSEEEEEEESS SSSEE  TTEEEEEHHHH  :    
ExpBur          :eebeebbbbbbbbbbbebeeee-eeeeebebbbbbbeebbebbe--bbbebbeebbebbbebbeeebebebbbbbbbbbbbeebbbbbbbbbbbbbbbbb:    
Contact         :bb                                                                                                  

queryA       370:DPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEINTP: 465
                :*   **      *   ***************  ************   **            * *    *        *  * * **** *   *     :
6ydx_B_1     323:DSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQSS: 414
SecStr          : TTT  HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGGGGTHHHHHHHHHHHHHHH----- GGG THHHHHHHHHHHHHHHHSTT   SS---    SH:    
ExpBur          :eeeebbbeebbebbebbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebebebebbebbbebbebbbbebbbebb---eebeee:    

queryA       466:AQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--SQ: 563
                : ** * **  ** ** * * **   ******      ***   *       ***   *  *         *   *  **** ***  **      *   *:
6ydx_B_1     415:EQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNEVTNQX-----XDVKRMMKTWTLQKGFPLVTVQKKGKELFIQQ: 509
SecStr          :HHHHTTSSHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTEEE HHHHHHHHHHHH  -------  TTTTHHHHHSSS EEEEEEEETTEEEEEE:    
ExpBur          :bebbbbbbebbebbbbbbbbbbeeebeeeebeebbbebbeebeeebbebeebbebbeeeeee-------eebebbebbbeebbbbbbbbeeeebebebeb:    

queryA       564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661
                :* * *             * *  *      **    *               *    **  * *  *** * *    *     **           **  :
6ydx_B_1     510:ERFFLXXXXXXXXXXX-XYLWHIPLSYVTEGRNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRANL: 608
SecStr          :EE   -------------    EEEEEEEEETTTEEEEEEEEE SSEEEEE SS EEEEEESGGG SSSEEEE HHHHHHHHHHHHH GGGS HHHHHHH:    
ExpBur          :ebbee-------------eebebbbbbbbbbeeeeeeeeeeebeeeeeebebeeebebbbbbbebebbbbbbbeeebbeebbebbeeebebbbbebbbbb:    

queryA       662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMDQY: 751
                :**  * **   ***   *      *  *    *   **       *     *  * *       **  *    *           *   **    *    :
6ydx_B_1     609:INNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE--: 702
SecStr          :HHHHHHHHHHTSS HHHHHHHGGGGGG   HHHHHHHHHHHH---HHHHHHHHHT H-HHHHHHHHHHHHHTHHHHHT  SSS S HHHHHHHHHHHH--:    
ExpBur          :bbbbbbbbeeeebebbbbbebbebbeebeebbbbebbbebbe---bbbbbbbbeeee-ebbeebbeebbebbeebbeebeeeeeeebbebebbeebbe--:    

queryA       752:SEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNP: 851
                :        **      *      **  **              **            * *            *  *   *** *     *       ** :
6ydx_B_1     703:-------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSLNG: 793
SecStr          :-------HHHHTT TTHHHHHHHHHHHHHTTTT S   STTHHHHH--HHHTTSHHHHHHHHHHHHH S HHHHHHHHHHHHT S HHHHHHHHHHHHHT:    
ExpBur          :-------bbbebebeebeeebeeebeebbeeeeeeebebbbbbbbb--bbbbeeeebbebbbebbeeeebbbbbbbbbebbbebeeeebbeebbebbbee:    

queryA       852:DLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWV: 951
                :*  * *     *        *  * ****  ** **      **    *     *  ***   *     *     *  *    *    ***    ** * :
6ydx_B_1     794:DNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQWM: 891
SecStr          :SSS GGGHHHHHHHHHHSHHHHHHHHHHHHHTHHHHHHHS SSSHHHHHHHHHHHTT   HHHHHHHHHHHHHH HHHH--T HHHHHHHHHHHHHHHHH:    
ExpBur          :eebbbbbbbbbbebbbebeebbeebbebbeebbebbeebbebbbebbbbbbebbbebbbeeeebeebeebbeeeeeebb--ebebbebbbbebeebbebb:    

queryA       952:KENKEVVLQWF: 962
                :  *      * :
6ydx_B_1     892:EKNLKSLTWWL: 902
SecStr          :HHHHHHHHHH :    
ExpBur          :eebbeebeeeb:    


Input Residue Numbers for Focused Sites

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