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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [891 aa] | M1-family alanyl aminopeptidase :Q8IEK1_PLAF7 | |
2 | b | C 1 (A) | non-polymer(7ML) | [(7~{S})-6,6-bis(oxidanyl)-4-phenyl-5,7,8,9-tetrahydrobenzo[7]annulen-7-yl]azanium | 213Q(E) 351A(V) 353A 354M 355E 385V 388H 389E 392H 410N(K) 411E 472F(Y) 477Y (identity: 69.2 %/29.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6sbq_A_1 identity=29.8% |
queryA 134:GHRVVLRGVG-GSQPPDIDKTELVEPTEYL----VVHLKGSLVKDSQYEMDSE--FEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDE: 226 :* * *** * *** ** * * ** * * * * * * * * * * : 6sbq_A_1 80:GEDLVFDGVGLKINEISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKS--------KNIIVSQCEATGFRRITFFIDR: 171 SecStr :S EEEE S EEEEEEETTEE BTTTEEE SSEEEE GGGS SSSEEEEEEEEE GGG TT SEEEEE--------TTEEEEE TTTTGGGTS B S: ExpBur :eeebebbbbebeeeebbbeeeebeeeebbebeeeebbbbeeebbeeebebebbbbbebbebebbbbbbeb--------eebbbbbbbbbbbbebbbbbbe: Contact : b queryA 227:PAMKAEFNITLIHPKDL--TALSN-------MLPKGPSTPLPEDPNWNVTEFHTTPKMSTYLLAFIVSEFD-----YVEKQASNGVLIRIWARPSAIAAG: 312 :* * * * * *** * * ** * * ** * * * * : 6sbq_A_1 172:PDMMAKYDVTVTADKEKYPVLLSNGDKVNEFEIPGGRHGARFNDP-------HLKP---CYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKL: 261 SecStr :TT EEEEEEEEEETTT EEEESSEEEEEEEETTTEEEEEEEEE-------EEE ---GGG EEEE EEEEEEEEE TTT EEEEEEEEEGGGGGG : ExpBur :bbbbbebbbbbbbeeeebeebbbbbeeeeeeeeeeebbbbebebe-------eebb---bbbbbbbbbebeeeebebebeeeeeebebbbbbbeebeebb: queryA 313:HGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEG: 412 : ** * * * *** ***** ** **** * * ** ** * ** ** * * * **: 6sbq_A_1 262:Q--WALECLKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHNYTGNRVTLRDWFQLTLKEG: 359 SecStr :--- HHHHHHHHHHHHHHHH SSEEEEEEES SSSEE TTEEEEEGGGT TTTS THHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHH: ExpBur :---bbbebbeebbebbbebbebbbbbeebbbbbbbbbbebbbbbbbbbbbbbebbbbbbeebbbebbeebbebbbbbbbbbbbbbebbbebbbbbbbbbb: Contact : b bbb b bb b bb queryA 413:FASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYL: 504 : * * * * * * * * *** * * ** * ** * * * * * : 6sbq_A_1 360:LTVHRENLFSEEMTKTVTTR----LSHVDLLRSVQFLEDSSPLSHPIRP-ESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYI: 446 SecStr :HHHHHHHHHHHHHH SSHHH----HHHHHHHHHHHHHHHHSTT SS -SEESSGGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbbbbbbbbbeeebebeebb----bebbbebbbbbbbbbebebbbbbbb-ebbbbbbbbebbbbbbbbbbbbbbbbebbeeeebeebbeebb: Contact : b b |