Protein Model on 6mgq_B_1_I_1 (TEMPLATE: 6mgq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) B 1 (B) polymer(polypeptide(L)) [858 aa] Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN
2 b I 1 (I) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 90R(H) 91P(A) 92Y(N) 94T 95P(T) 240P(E) 258L (identity: 28.6 %/36.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6mgq_B_1 identity=36.1%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGS-: 169
                :**  ***    *  *       **        * *   *  *    *  ** **  *     *  *  **   *          *  *       *    :
6mgq_B_1      17:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHL-----QISRATLRKGAGERLSEEPLQVLEHPRQEQIALLAPEP: 106
SecStr          :   SS  TTEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS  SEEEEE  S -----EEEEEEEE   GGG  EEE B  EETTTTEEEEE SS :    
ExpBur          :beeeebbebbebebbbbbbbbebee-----eebebbbebebebeeebebbbbbbbeb-----ebeebbbeeeeeeeeeeeebeeeebeebebbbbebeee:    
Contact         :                   bbb bb                                                                           

queryA       170:LVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPEDPNW: 264
                :*     *       * *     *** * *   **  *   * **     **  ******** ** * *         * *** * *       * **   :
6mgq_B_1     107:LLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIED---: 202
SecStr          :  TT EEEEEEEEEEE BSSSSEEEEEEEE TT  EE-EEEEEE TTTTGGGTS B  STTS BEE  EEEE TT EEEESS EEEEEEEETTEEEE---:    
ExpBur          :beeeeebebbbbbebebbeeebbbbebebebeeeeee-ebbbbbbbbbbbbbbbbbbbbbebbbbbbbbbebeeebebbbbbeeeeeeeeeeebebb---:    
Contact         :                                                                        b                  bbb      

queryA       265:NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRE: 364
                :    *  * ****** *** * *  * *    **     * *  *     ****      * *       ****** *    ***  ******** ****:
6mgq_B_1     203:---HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRE: 297
SecStr          :---EE    SB GGG  EEEE  EEEEEE TT  EEEEEE GGGG--GGGHHHHHHHHHHHHHHHHHH    SSSEEEEEEETT SSSEE  TTEEEEEH:    
ExpBur          :---bbeebeebbbbbbbbbbbbbeeeeeebeeebebbbbbbeeeb--eebebbbebbbebbebbbebbebebebebbbbbbbbebeeebbbbbbbbbbeb:    

queryA       365:NSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINT: 464
                :  ****   ** * *       ************** *************   *        *     *          * **** **** ***      :
6mgq_B_1     298:SALLFDAEKSSASSKLDITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP---VEN: 393
SecStr          :HHH   SSS  SSHHHHHHHHHHHHHHHHHBTTTEEESSGGGHHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHTSSS   S   --- S :    
ExpBur          :ebbbeeeeeeeeeeebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-beebbebbeebbeeebeebbbe---bee:    

queryA       465:PAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRDIMNRWT: 544
                :**** * **  ** ***  * **   ** * ** *   **    * **    ***                                    *   ** **:
6mgq_B_1     394:PAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVDVKTMMNTWT: 493
SecStr          :HHHHHHHS HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTEEE HHHHHHHHHT ----------------------------   HHHHHHHHH:    
ExpBur          :beebeeebeeebbbbbbbbbbbbbebbeeeebeebbbebbeebeeeebebeebbebbeee----------------------------eeebeebbebbb:    

queryA       545:LQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRK: 641
                :** *** **  *  *      ***     *          * * ** * *          *        *      **   *    *** * *    *  :
6mgq_B_1     494:LQRGFPLITI-TVRGRNVHMKQEHYMKGSDG----APDTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDS: 587
SecStr          :TS S EEEEE-EEETTEEEEEEEE   SS S----SS       EEEEEEESS  S EEEEE SSE-EEEE SS  S EEESGGG SSSEEEETTTHHHH:    
ExpBur          :eeebbbbbbb-beeeeebebebebbeebeee----eeeeeeebbbbbbbbbeeeeeeeebbbeeee-eebebeeebebbbbbbebbbbbbbbbeeebbee:    

queryA       642:IQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTN: 738
                :    *   * *     **  ** ** * *  *     **   * *  *   **    *  *    ***   *  **    *  *      *         :
6mgq_B_1     588:LTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQ: 682
SecStr          :HHHHHHHTS SS HHHHHHHHHHHHHHHHHTSS HHHHHHHHGGGGG   HHHHHHHHHHHHHHHHHHTTSS  HHHHHHHHHHHHHHHHHH-----HH :    
ExpBur          :bbebbeeebeebeebbbbbbbbbbbbbbeeeebebbebbbbbebbeebeebbbbebbbebbeebbebbbbeeeeebbeebbebbbebbeebb-----eeb:    

queryA       739:NWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKEL: 838
                : *                   **      *     * *  * *   *          *   *      * ***            *      **      :
6mgq_B_1     683:TWTD-EGSVSERMLRSELLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNK: 779
SecStr          : SS - S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTGGG    HHHHHHHH--HHHTTSTTHHHHHHHHHTT  TTHHHHHHHHHHHT S H:    
ExpBur          :ebee-eebbbebebbbebbbbbbebebeebeeebeeebeebeeeeeebeeeebbbebbb--bbbbeeeebbebbbebbeeeeeeeeeebbeebbbbbeee:    

queryA       839:WILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALE: 938
                :  *   *      *             *  *  *  * * *   ** **      ** *        *  ***   *     *     *   **  *   :
6mgq_B_1     780:EKLQWLLDESFKGDXXXXXXXXXILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--GSQLRCVQ: 877
SecStr          :HHHHHHHHHHHHH --------- THHHHHSTTTHHHHHHHHHHHHHHTTTTS   HHHHHHHHHHHHSS   HHHHHHHHHHHHHHHHH--HS  TTHH:    
ExpBur          :ebbeebbeeeeeee---------ebeebebbeebeeebbebbbebeeeeeeeeebeeeeeeeeeebebeebbeeebeeebeeebeeebee--eeeeebbe:    

queryA       939:QALEKTKANIKWVKENKEVVLQWF: 962
                :*  *    ** *   *      * :
6mgq_B_1     878:QTIETIEENIGWMDKNFDKIRVWL: 901
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebeeebeebeeebeebbeebeebb:    


Input Residue Numbers for Focused Sites

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