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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [861 aa] | Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN | |
2 | b | G 1 (G) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 90R(H) 91P(A) 92Y(N) 94T 95P(T) 240P(E) (identity: 16.7 %/35.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6mgq_A_1 identity=35.9% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGS-: 169 :** *** * * ** * * * * * ** ** * * * ** * * * * : 6mgq_A_1 17:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHL-----QISRATLRKGAGERLSEEPLQVLEHPRQEQIALLAPEP: 106 SecStr : SS TTEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS SEEEEE S -----EEEEEEEEE GGG EEEE EEEEETTTTEEEEE SS : ExpBur :beeeebbeebebebbebbbbbebee-----eebebbbebebebeeebebbbbbbbeb-----ebeebbbeeeeeeeeeebebeebebeeeebbbbbbeee: Contact : bbb bb queryA 170:LVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPEDPNW: 264 :* * * * *** * * ** * * ** ** ******** ** * * * *** * * * ** : 6mgq_A_1 107:LLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIED---: 202 SecStr : BT EEEEEEEEEEE BTTSSEEEEEEEE TTS EE-EEEEEE TTTTHHHHS B STTS BEEEEEEEE TT EEEESS EEEEE STT EEE---: ExpBur :beeeeebebbbebebebbeeeebbbbbebebeeeeee-ebbbbbbebbbbbbbbbbbbbbebbbbbbbbbbbeeebebbbbbeeeeeeeeeeeebbb---: Contact : b bb queryA 265:NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRE: 364 : * * ****** *** * * * * ** * * * **** * * ****** * *** ******** ****: 6mgq_A_1 203:---HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRE: 297 SecStr :---EEEE SB GGG EEEE EEEEEE TT EEEEEE TTGG--GG HHHHHHHHHHHHHHHHHTTS SSSEEEEEEETT SSSEE TTEEEEEH: ExpBur :---bbeebeebbbbbbbbbbbbbeeeeeebeeebebbbbbbeeeb--ebbebbbebbbebbebbbebbebebbbebbbbbbbbebeebbbbbbbbbbbeb: queryA 365:NSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINT: 464 : **** ** * * ************** ************* * * * * **** **** *** : 6mgq_A_1 298:SALLFDAEKSSASSKLDITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP---VEN: 393 SecStr :HHH SS S TTHHHHHHHHHHHHHHHHHBTTTEEESSGGGHHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHTSSS S --- SS: ExpBur :ebbbeeeeeeeeebebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-beebbebbeebbeeebeebbbe---beb: queryA 465:PAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRDIMNRWT: 544 :**** * ** ** *** * ** ** * ** * ** * ** *** * ** **: 6mgq_A_1 394:PAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTXXXXXXXXXXXXXXXXXXXXXXXXERVDVKTMMNTWT: 493 SecStr :HHHHTTT HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTEEE HHHHHHHHHT ------------------------ HHHHHHHHH: ExpBur :beeeeeebeeebbbbbbbbbbbbbebbeeebbeebbbebbeebeeeebebeebbebbeeeeee------------------------eebebeebbebbb: queryA 545:LQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRK: 641 :** *** ** * * *** * * * ** * * * * ** * *** * * * : 6mgq_A_1 494:LQRGFPLITI-TVRGRNVHMKQEHYMKGSDG----APDTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDS: 587 SecStr :SSSS EEEEE-EEETTEEEEEEEE SS---- EEEEEEESS S EEEEE SSE-EEEE SS S EEESGGG SSSEEEETTTHHHH: ExpBur :eebbbbbbbb-beeeeebebebebbeeeeee----eeeeeeebbbbbbbbbeeeeeeeeeebeeee-eebebeeebebbbbbbbbbbbbbbbbeeebbee: queryA 642:IQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTN: 738 : * * * ** ** ** * * * ** * * * ** * * *** * ** * * * : 6mgq_A_1 588:LTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQ: 682 SecStr :HHHHHHHTSTTS HHHHHHHHHHHHHHHHTTSS HHHHHHHHGGGGS SHHHHHHHHHHHHHHHHHHHTSS TTHHHHHHHHHHHHHHHH-----HH : ExpBur :bbebbeeebeebeeebbbbbbbbbbbbbeeeebebeebbebbebbeebeebbbbbbbbeebeebbbbbbbeeeeebbeebbebbbebbeebb-----eeb: queryA 739:NWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKEL: 838 : * ** * * * * * * * * * *** * ** : 6mgq_A_1 683:TWTD-EGSVSERMLRSELLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNK: 779 SecStr : SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S TTTHHHHH--HHHTSSHHHHHHHHHHHHH HHHHHHHHHHHTS S H: ExpBur :ebee-eebebebebbbebbbbbbebebeebbeebebebeebbeeeeeeebeebbbbbbb--bbbbeeeebbeebeebeeebeeeeebebbbbbbbbbeee: queryA 839:WILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALE: 938 : * * * * * * * * * ** ** ** * * *** * * * * : 6mgq_A_1 780:EKLQWLLDESFKGDXXXXXEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFF--SSLXXXXSQLRCVQ: 877 SecStr :HHHHHHHHHHHT ----- HHHHHHHHHT SSSHHHHHHHHHHTHHHHHHHH SSTTHHHHHHHHTTSS SHHHHHHHHHHH--TT ---- HHHHHH: ExpBur :ebbeebbeebeeee-----ebbebbbebbebeebbebbeebbeebbeebeeeeeeeeebbebbbbbbbebbbeeeebeebeebb--eee----eeeebbe: queryA 939:QALEKTKANIKWVKENKEVVLQWF: 962 :* * ** * * * : 6mgq_A_1 878:QTIETIEENIGWMDKNFDKIRVWL: 901 SecStr :HHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebeeebeebbeebeebbeebeebb: |