Protein Model on 6ea4_A_1_F_1 (TEMPLATE: 6ea4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [883 aa] Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN
2 b F 1 (F) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 450A(N) 547M(K) 578S(L) (identity: 0.0 %/36.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6ea4_A_1 identity=36.7%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163
                :*   ***    *  *     * **  *     *  *         **  ** *** *   * **      *    *        *      *  * * * :
6ea4_A_1      12:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 105
SecStr          :   SS  SSEEEEEEEEEEEEETTTTE-----EEEEEEEEEEE S  SEEEEE SS EEEEEEEE SSSGGG TT EE EEEEEGGGTEEEEE S-S   :    
ExpBur          :eeeeebbeebebebbebbbebebeeee-----bebebebbbebeeebeebbbbbeebeeeebebebeebeebeeeeeebeebebeeebbbbbebe-eebe:    

queryA       164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259
                : ***        *     *   * *   *** * *   *      * *      **  *******  ** * *         ***** **     *    :
6ea4_A_1     106:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 196
SecStr          :TT E--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B  STT  BEEEEEEEE TT EEEESS- EEEEEE TTS :    
ExpBur          :eeee--------bebbbebeeebeeebbbbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeeeeeee:    

queryA       260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358
                : **       * ** ****** * **  *       * **   * * *      *  ***      * *     *  *** * * *  ***  *******:
6ea4_A_1     197:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 288
SecStr          :EEE------EE    SB GGG  EEEE  EEEEEE TT  EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT    SSEEEEEEESS SSSEE  TT:    
ExpBur          :bbb------bbeebeebbbbbbbbbbbebeeeebebeeebebbbbbbeebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb:    

queryA       359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458
                :* **** ******  ** * *  *  **************** ***** ******* * *        *     *   **    *   * * ** * * *:
6ea4_A_1     289:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 387
SecStr          :EEEEEHHHH   TTT  HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHTSTT   SS  :    
ExpBur          :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbee:    
Contact         :                                                                                           b        

queryA       459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538
                :*    ** ** * **  ** ***  * **  ** *  *  *   **  * * *     **  *                                  *  :
6ea4_A_1     388:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXENAEVKE: 484
SecStr          : --- SHHHHHHTSSTTTTHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHH ---------------------------- HHHHHH:    
ExpBur          :b---eeeeebbbbbbbbbebbbbbbbbbbbeebeeeebeebbbebbeebeeebbebeebbebbbe----------------------------eeeebee:    

queryA       539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631
                : *  **** * *   *  *     * ** **      **     *     * *  * *                     *       **  *    *** :
6ea4_A_1     485:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 580
SecStr          :HHHHHHSS S EEEEEEEETTEEEEEEEE  SS  TTSHH---HHHHHTT    EEEEEEESS  S EEEEE SSE-EEEE SS  S EEESGGG SS E:    
ExpBur          :bbebbbebebbbbbbbeeeeeebebbbbbbbbbbbeeeee---beebbeebebebbbbbbbeeeeeeeeeebeeee-eebebeeebebbbbbbbbbbbbb:    
Contact         :        b                                     b                                                     

queryA       632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728
                :* *    *    ***   *       *   * * * *  *       **  *  *  *         ** *  *  * **   *      * **     *:
6ea4_A_1     581:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 680
SecStr          :EEE TTHHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHHHTSS HHHHHHHGGGGGS   HHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHTHH:    
ExpBur          :bbbeeebbeebbebbeeebeebeebbbbbbbbbbbbbbbbebbebeebbebbebbeebeebbbbebbbebbeebbebbebeebeebbebbbebbbeebee:    

queryA       729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828
                :           *        *          **      *      ** ****      *       **           *    **        *  * :
6ea4_A_1     681:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 772
SecStr          :HH-----HT  SS - S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTSS     GGGHHHHH--HHHTTSHHHHHHHHHHHHH S HHHHHHH:    
ExpBur          :bb-----eebebbe-eeebbebbbbeebbebbbebebeebeeebeebbeebeeeeeeeebbbbbbebbb--bbbbeeeebbebbbebbeebbbbbbeebb:    

queryA       829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928
                :  **  **    *            *  *        *     ** * ****  **  *      **      *   *  **    **    *    *  :
6ea4_A_1     773:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 872
SecStr          :HHHHHT S HHHHHHHHHHHHH SSS GGGHHHHHHHHHTSHHHHHHHHHHHHHTHHHHHHHS TTSHHHHHHHHHTTTT  SHHHHHHHHHHHHHHHHT:    
ExpBur          :bbbbbbbeeeebbeebbebbbeeeebbbbbbbebbebbbeeeebbebbbebbeeebeebeeebebbbebbbebbebbbbbbbbeebeeebeebbeebeee:    

queryA       929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967
                :  **        **    ****   *      *   *  :
6ea4_A_1     873:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 909
SecStr          :--T   THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :--ebebebbebbbbbbebbbebbeebbeebeebbeebee:    


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