Protein Model on 5z65_A_1_G_1 (TEMPLATE: 5z65 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [900 aa] Aminopeptidase :K7GMF9_PIG
2 b G 1 (G) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 228A 507F 510Q 511N (identity: 100.0 %/79.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5z65_A_1 identity=79.8%
queryA        68:SKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLK: 167
                :** ******* ** **** **********  *** *** * *** * * **************  *** ******* ** * ** ***** *********:
5z65_A_1       4:SKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFICQEPTDVIIIHSKKLNYT-TQGHMVVLRGVGDSQVPEIDRTELVELTEYLVVHLK: 102
SecStr          :  TTSSSS  SSEEEEEEEEEEEEE S  SSS  EEEEEEEEEEEESS EEEEEEE  S EE - SSSS EEEESTT     EEEEEEETTTTEEEEEEE:    
ExpBur          :eeebeeeebeebbebebbebebebebeeeeeeebbbebebbbebebeeebebbbbbbbebebe-beeeebebebeeebebeebeebeebeebbbbbbbbe:    

queryA       168:GSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVT: 267
                :***     *** *** ******************** ** ******  **************** ********  ******* *** **** ***** **:
5z65_A_1     103:GSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVT: 202
SecStr          :EEE TT EEEEEEEEEEE  SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B  STTS BEEEEEEEEETTSEEEESS BSS  EE TT TTEEEE:    
ExpBur          :eebeeeeebebbbebebebbeeebbbbbbebeeeeeebbbbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbeeeeeeeebeeeeebbbb:    
Contact         :                                                            b                                       

queryA       268:EFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSL: 367
                :** *** ******* *****  *   * *********** *** *** ************** ** *********** ******************** *:
5z65_A_1     203:EFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTPYPLPKSDQIALPDFNAGAMENWGLVTYRENAL: 302
SecStr          :EB    SB GGG  EEEE  EEEEEE TT  EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHHTS  SSSEEEEEEETT TT EE  TTEEEEEHHHH:    
ExpBur          :ebeebbebbbbbbbbbbbebeebeeeeeeebebebbbebebbeeebbebbbebbbebbebbeebbebebebebbbbbbbbebeeebbbbbbbbbbebebb:    

queryA       368:LFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQ: 467
                :**** *** ************************  ********************* ********** *  ***************** *** * *****:
5z65_A_1     303:LFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQ: 402
SecStr          :   TTT  HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTS  GGGHHHHTHHHHHHHHTSTT   S   GGG  SHHH:    
ExpBur          :bbbeebbbbebebebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbeebbeebebebbbbbebbbebbeebbeeebebbbbeeeebeeeee:    

queryA       468:ISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEHF: 566
                :*** ** ********* **** ** ** ** ******* ****** ** ** *** **    ** ** *** ** *************** **  ** **:
5z65_A_1     403:ISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQKHF: 502
SecStr          :HHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHHHT SSS  SS HHHHHHHHHSS S EEEEEETTTTEEEEEE :    
ExpBur          :beebeeebbebbbbbbbbbbbebbeeebbeebbbebbeebeeeebebeebbebbbebbeeeeeeebeeebebbbbbbbebbbbbbbebebeebebebebb:    
Contact         :                                       b  bb                                                        

queryA       567:LLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIINDA: 665
                :***  ***** * * * ***** **  *  *  *** **  ****** *    ***** *****  ***** *** ** ***   * ******** * * :
5z65_A_1     503:LLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNINVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDS: 602
SecStr          : SSTT    S  TTSS   EEE EEETTEE   EEE SSSEEE GGG   TT  EEESGGG SSSEEEE HHHHHHHHHHHHH GGGS HHHHHHHHHHH:    
ExpBur          :bbeeeeeeeeebeeebebbbbbbbbeeeeeeeebbbeeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbeebbebbeeebeebebbbbbbbbbbb:    

queryA       666:FNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGV: 765
                :**** ** ******* *****  *  **** ********* ************* ** *** *** **   * ** * ********** ********** :
5z65_A_1     603:FNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGL: 702
SecStr          :HHHHHTTSS HHHHHHTTGGGGG  SHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHHHTT :    
ExpBur          :bebbebeebebebbbebbbbbeebeebbbbbbbeebbeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbeebbebbbbbbbbebbbebeb:    

queryA       766:PECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTIIS: 865
                :* **     ** ***  * *********** *********   ***** *   * ********* ***** * * ***** ***************** *:
5z65_A_1     703:PQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATSTINS: 802
SecStr          :HHHHHHHHHHHHHHHH TTS  S GGGHHHHHHHHHHHS HHHHHHHHHHHHH  SHHHHHHHHHHHTT   HHHHHHHHHHTT TTTS GGGHHHHHHH:    
ExpBur          :eebeebbeebbeebeeeeeeeebebbbbebbbebbbeeebeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebeeeeebeeebbbebbbe:    

queryA       866:ITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTEN: 965
                :*  ***** * ************ ************** ****** * ********** *   ******************************* ** * :
5z65_A_1     803:IASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIEH: 902
SecStr          :HHHSTTTHHHHHHHHHHHTTTHHHHTSS    HHHHHHHHTTT  SHHHHHHHHHHHTTTTTT  GGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT:    
ExpBur          :bbebeebbebbbebbeeebebbeebeeeeebebeebbebbbebbbeeebbeebeebbeeeeebebeebeebbeebbeebeebbebbeebeeebbebbeee:    

queryA       966:S: 966
                :*:
5z65_A_1     903:S: 903
SecStr          : :    
ExpBur          :e:    


Input Residue Numbers for Focused Sites

ex) 2,15,123