Protein Model on 5lhd_A_1_VA_1 (TEMPLATE: 5lhd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [903 aa] Aminopeptidase N :AMPN_HUMAN
2 b VA 1 (A) non-polymer(EDO) 1,2-ETHANEDIOL 253G 254P 256T 266V 268E (identity: 100.0 %/99.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5lhd_A_1 identity=99.8%
queryA        63:TTLDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYL: 162
                :****************************************************************************************************:
5lhd_A_1      46:TTLDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYL: 145
SecStr          :    TTSGGGSSS  SSEEEEEEEEEEEE  S  TTS  EEEEEEEEEEEESS EEEEEEE  SEEE  BTTBSEEEEESTT     EEEEEEETTTTEE:    
ExpBur          :eeeeeeebebeeebeebbebebbebbbbbebeeeeeeebbbebebbbebbbeeebebbbbbbeebebeeeeeeebbbeebeebeebebeebeebeebbbb:    

queryA       163:VVHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDP: 262
                :****************************************************************************************************:
5lhd_A_1     146:VVHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDP: 245
SecStr          :EEEEEEEE TT EEEEEEEEEEE  SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B  STTS BEEEEEEEEETT EEEESS BSSS EEETTEE:    
ExpBur          :bbbbeeebeeeeebbbebebebebbeeebbbbbbbbeeeeeeebbbbbbbbbbbbbbbbbbbbbbbbbbebebbbbbeeebebbbbbeeeeeeeebeeee:    
Contact         :                                                                                          bb b      

queryA       263:NWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTY: 362
                :****************************************************************************************************:
5lhd_A_1     246:NWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTY: 345
SecStr          :EEEEEEB    SB GGG  EEEE  EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHHTS  SSSEEEEEEES  TT EE  TTEEEE:    
ExpBur          :ebbebebeebeebbbbbbbbbbbebeeeeeeeeeebbbbbbbbeebbeebbbebbbebbbebbebbbebbebebebebbbbbbbbebeeebbbbbbbbbb:    
Contact         :   b b                                                                                              

queryA       363:RENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEI: 462
                :****************************************************************************************************:
5lhd_A_1     346:RENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEI: 445
SecStr          :EHHHH   TTT  HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHH TTS GGGGHHHHTHHHHHHHHTSTT   S   GGG :    
ExpBur          :ebbbbbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbbebbeebebeebbbbebbbebbeebbeeebebbbbeeeeb:    

queryA       463:NTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLS: 562
                :****************************************************************************************************:
5lhd_A_1     446:NTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLS: 545
SecStr          : SHHHHHTTSSHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTEEE HHHHHHHHHHHHHHHT   SS HHHHHHHHHSS S EEEEEETTTTEEE:    
ExpBur          :eeeeebeebeebbbebbbbbbbbbbbebbeeebbeebbbebbeebeeebbebeebbebbeebbeeeeeeeeeebeebbbbbbebbbbbbbebebeebebe:    

queryA       563:QEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQII: 662
                :****************************************************************************************************:
5lhd_A_1     546:QEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQII: 645
SecStr          :EEE  S TT       TTSS   EEE EEETTEE   EEE SSEEE GGG   TT  EEESGGG SS EEEE HHHHHHHHHHHHHHGGGS HHHHHHHH:    
ExpBur          :bebbbbeeeeeeeeebeeebbbbbbbbbbbeeeebeebebeeeeeeeebbbbeeeebbbbbbebbbbbbbbbbeebbeebeebbeeebeebeebbbbbbb:    

queryA       663:NDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACS: 762
                :****************************************************************************************************:
5lhd_A_1     646:NDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACS: 745
SecStr          :HHHHHHHHTTSS HHHHHHTTGGGGG   HHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbebeebebebbbebbebbeebeebbbbebbbebbeebebbbbeeebbebbeebbeebbeebbeebeeebeebeeebeebbebbbbbbbbebbbe:    

queryA       763:NGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATST: 862
                :****************************************************************************************************:
5lhd_A_1     746:NGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATST: 845
SecStr          :TT HHHHHHHHHHHHHHHHSTTS  S HHHHHHHHHHHHHHS HHHHHHHHHHHHT   HHHHHHHHHHGGG   HHHHHHHHHHTT TTTS GGGHHHH:    
ExpBur          :bebeebeebbeebbeebeeeeeeeebebbbbebbbebbbeeeeeeebebbbeebeeeeebbbbebbbebbbbbeeeebbeebbeebeeeeebeebbbbeb:    

queryA       863:IISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWF: 962
                :*****************************  *********************************************************************:
5lhd_A_1     846:IISITNNVIGQGLVWDFVQSNWKKLFNDYXXGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWF: 945
SecStr          :HHHHHHSHHHHHHHHHHHHHSHHHHTT  --    HHHHHHHHHTT  SHHHHHHHHHHHHHTSSS  GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbebbebeebbebbbebbeebbeebeeee--eebebeebbebbbebbbeeebbebbeebeeebeeeebeebeebbeebbeebeebbebbeebeeebeebb:    

queryA       963:TENSK: 967
                :*****:
5lhd_A_1     946:TENSK: 950
SecStr          :HHT  :    
ExpBur          :eeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123