Protein Model on 4kxd_A_1_G_1 (TEMPLATE: 4kxd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [875 aa] Glutamyl aminopeptidase :AMPE_HUMAN
2 b G 1 (G) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 807E 837E(N) (identity: 50.0 %/37.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4kxd_A_1 identity=37.8%
queryA        59:PASATTLDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYT-LSQGHRVVLRGVGGSQPPDIDKTELVE: 157
                :***    * *  *   ***    *  *     * *           *           *     *      * *    *           *  *      :
4kxd_A_1       4:PASE---DESGQWKNFRLPDFVNPVHYDLHVKPLLEED-----TYTGTVSISINLSAPTRYLWLHLRETRITRLPELKR-----------PSGDQVQVRR:  84
SecStr          : B  ---  SSGGGSSS  TTEEEEEEEEEEEEEGGGT-----EEEEEEEEEEEE S  SEEEEE  SSEEEEEEEEE -----------TTS EE EEE:    
ExpBur          :eeee---eeeeebeeeebbebbebeebebbbebebeee-----ebebebebbbebeeebeebbbbbeebebeeebebee-----------eeeeebebee:    

queryA       158:PTEYLVVHLKGSLVK--------DSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM: 249
                :  **                   *  *    ** * *   * ****  * *    *  * *     ************  **   *   ***   *****:
4kxd_A_1      85:CFEYKKQEYVVVEAEEELTPSSGDGLYLLTMEFAGWLNGSLVGFYRTTYTENGRVKSIAATDHEPTDARKSFPCFDEPNKKATYTISITHPKEYGALSNM: 184
SecStr          :EEEEGGGTEEEEEES      SSS  EEEEEEEEEE SS SSEEEEEEEEETTEEEEEEEEE TTTTHHHHS B  STT  BEEEEEEEEETTSEEEESS:    
ExpBur          :bbbbeebebbbbbbeeeeeebeeeeebebebebbbebeeebebbbbbebebeeeeebbbbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbeebebbbbb:    

queryA       250:-LPKGPSTPLPEDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPD: 348
                :   *  *     *  *  * *     *****  * *  ** *      *    *   *         ** * *      *       * *** * *  **:
4kxd_A_1     185:PVAKEESV----DDKWTRTTFEKSVPMSTYLVCFAVHQFDSVKRISNSGKPLTIYVQPEQ--KHTAEYAANITKSVFDYFEEYFAMNYSLPKLDKIAIPD: 278
SecStr          : EEEEEES----SSSEEEEEE    SB GGG  EEEE  EEEEEE TTS EEEEEE GGG--GGGGHHHHHHHHHHHHHHHHHTT   SSS EEEEE SS:    
ExpBur          :eeeeeeee----eeebbebbbeebeebbbbbbbbbbbebeebeeebeeebebbbbbbeeb--eebbebbbebbeebbbbbbebbebebebebbbbbbbbb:    

queryA       349:FNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDA: 448
                :*  ******** ****  ** **  * ***  ** ** **** ****** **  ** **********  * **   **  *   * * * **  *   * :
4kxd_A_1     279:FGTGAMENWGLITYRETNLLYDPKESASSNQQRVATVVAHELVHQWFGNIVTMDWWEDLWLNEGFASFFEFLGVNHAETDWQMRDQMLLEDVLPVQEDDS: 378
SecStr          : SSSEE  TTEEEE GGGT   TTTS HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG HHHHHHHHTHHHHHHHTT:    
ExpBur          :beeebbbbbbbbbbbbbbbbbbeeebbbebbbebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeeebeebebeebbbbebbbebbeebb:    

queryA       449:LASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMG: 548
                :* ****         **  *   ** ****** * ****        *  *   **      *      *  * **       **  *   *  ** ***:
4kxd_A_1     379:LMSSHPIIV---TVTTPDEITSVFDGISYSKGSSILRMLEDWIKPENFQKGCQMYLEKYQFKNAKTSDFWAALEEAS-----RLP--VKEVMDTWTRQMG: 468
SecStr          :STT   SS ---   SHHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHSTTEEE HHHHHHHHHHHH----- S --HHHHHHTTTSS  :    
ExpBur          :bebbbebeb---ebeebeebbbbbbebbebbbbbbbbbbbebbeeeebbebbbebbeebeeebbebebbbebbeebb-----eee--beebbbbbbebbb:    

queryA       549:FPVITVDTSTGTLSQEHFLLDPDSNVTR-PSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFS-----TSGNEWVLLNLNVTGYYRVNYDEENWRKI: 642
                : **  *        *  *****  *    **   * *  *     *            *             ***     *    * *****    *  *:
4kxd_A_1     469:YPVLNVN-GVKNITQKRFLLDPRANPSQPPSDLGYTWNIPVKWTEDNITSS---VLFNRSEKEGITLNXXXXSGNAFLKINPDHIGFYRVNYEVATWDSI: 564
SecStr          : EEEEEE-TTTEEEEEE  S TTS TT S  TTTT   EEEEEEETTEEEE---EEE TT TT EE  ----   S  EESGGG SSSEEE  HHHHHHH:    
ExpBur          :bbbbebe-eeeebebebbbbbeebeeeeeebebebebbbbbbbbbeeeeee---eebeeeeeebbebe----eeeeebbbbbebbbbbbbbbeeebbeeb:    

queryA       643:QTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMF-DRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWR: 741
                : * *   *       **  * *** ** *       *** *  *  *    **    *   *   ** *  * *     *   ** *           * :
4kxd_A_1     565:ATALSLNHKTFSSADRASLIDDAFALARAQLLDYKVALNLTKYLKREENFLPWQRVISAVTYIISMFEDDKELYPMIEEYFQGQVKPI-----ADSLGWN: 659
SecStr          :HHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHTTTTGGG   HHHHHHHHHHHHHHHHHTTT TTHHHHHHHHHHHHHHHH-----HHHH SS:    
ExpBur          :beebeeebeebebbbbbbbbbbbbbbbbbeebebebbbebbebbeebeebbbbebbbebbebbbbbbeebeebeebbeebbeebbbeb-----beebbbe:    

queryA       742:EIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEE-EWDFAWEQFRNATLVNEADKLRAALACSKELWI: 840
                :                  **  *  *     * ** **       *   ***  **       * *  *    **     *  *  **   **  *    :
4kxd_A_1     660:DAGDHVT-KLLRSSVLGFACKMGDREALNNASSLFEQWLNGTVSLPV--NLRLLVYRYGMQNSGNEISWNYTLEQYQKTSLAQEKEKLLYGLASVKNVTL: 756
SecStr          :  S HHH-HHHHHHHHHHHHHTT HHHHHHHHHHHHHHHTT     T--TTHHHHHHHHHHHH  HHHHHHHHHHHHH   HHHHHHHHHHHHT S HHH:    
ExpBur          :eeeebbe-ebbbeebbbbbbebebeebbeebbebbeebeeeeeebeb--bbbebbbebbbeeeeeeebbeebbeebeeeebbbbbebbbbbbbbbeeeeb:    
Contact         :                                                                 b                              b   

queryA       841:LNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQA: 940
                :* ***       **  **    *  *  *  *    *   * **  * * *                 * **  * * * *       * *   *  ** :
4kxd_A_1     757:LSRYLDLLKDTNLIKTQDVFTVIRYISYNSYGKNMAWNWIQLNWDYLVNRYTLNNRNLGRIV-TIAEPFNTELQLWQMESFFAKYPQAGAGEKPR--EQV: 853
SecStr          :HHHHHHHTT TTTS GGGHHHHHHHHHTSTTHHHHHHHHHHHTHHHHHHHH TT HHHHHGG-GGGTT  SHHHHHHHHHHHHHS   GGGHHHH--HHH:    
ExpBur          :beebbebbeeeebbebbbbbebbebbbebeebbebbbebbeebbeebeebbeebebebbebb-bbbeebbeeebbeebeebbeebeebbbbeebb--eeb:    

queryA       941:LEKTKANIKWVKENKEVVLQWF: 962
                :**  * ** * *        **:
4kxd_A_1     854:LETVKNNIEWLKQHRNTIREWF: 875
SecStr          :HHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbbbebbbbbeeebeeebeebb:    


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