Protein Model on 4hom_A_1_L_1 (TEMPLATE: 4hom )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [902 aa] Aminopeptidase N :AMPN_PIG
2 b L 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 571D(E) 573N (identity: 50.0 %/79.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4hom_A_1 identity=79.8%
queryA        67:QSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHL: 166
                :*** ******* ** **** **********  *** *** * *** * * **************  *** ******* ** * ** ***** ********:
4hom_A_1       1:QSKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYT-TQGHMVVLRGVGDSQVPEIDRTELVELTEYLVVHL:  99
SecStr          :   GGGSSS  SSEEEEEEEEEEEE  S  SSS  EEEEEEEEEEEESS EEEEEEE  S EE - SSSS EEEESTT     EEEEEEETTTTEEEEEE:    
ExpBur          :eeeebeeeebeebbebebbebebbbebeeeeeeebebebebebebebeeebebbbbbbbebebe-beeeebebeeeeebeebebeebeebeebbbbbbbb:    

queryA       167:KGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNV: 266
                :****     *** *** ******************** ** ******  **************** ********  ******* *** **** ***** *:
4hom_A_1     100:KGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSV: 199
SecStr          :EEEE TT EEEEEEEEEEE  SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B  STT  BEEEEEEEEETTSEEEESS BSSS EE TT TTEEE:    
ExpBur          :eeebeeeeebebbbebebebbeeebbbbbbebeeeeeebbbbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbeeeeeeeebeeeeebbb:    

queryA       267:TEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENS: 366
                :*** *** ******* *****  *   * *********** *** *** ************** ** * ********* ******************** :
4hom_A_1     200:TEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENA: 299
SecStr          :EEB    SB GGG  EEEES EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTTS  SSSEEEEEEETT TT EE  TTEEEEEHHH:    
ExpBur          :bebeebeebbbbbbbbbbbebeebeeebeeebebebbbebebbeeebbebbbebbbebbebbeebbebebbbebbbbbbbbebeeebbbbbbbbbbebeb:    

queryA       367:LLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPA: 466
                :***** *** ************************  ********************* ********** *  ***************** *** * ****:
4hom_A_1     300:LLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPA: 399
SecStr          :H   TTT  HHHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHHHHTSTT   S   GGG  SHH:    
ExpBur          :bbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbeeebebbbbeeeebebee:    

queryA       467:QISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEH: 565
                :**** ** ********* **** ** ** ** ******* ****** ** ** *** **    ** ** *** ** *************** **  ** *:
4hom_A_1     400:QISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQKH: 499
SecStr          :HHHTTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTSEE HHHHHHHHHHHHHT SS   SS HHHHHHHHHSS S EEEEEETTTTEEEEEE:    
ExpBur          :ebeebeeebbebbbbbbbbbbbebbeeebbeebbbbbbeebeeeebebeebbebbbebbeeeeeeebeeebebbbbbbbebbbbbbbebebeebebebeb:    

queryA       566:FLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIIND: 664
                :****  ***** * * * ***** **  *  *  *** **  ****** *    ***** *****  ***** *** ** ***   * ******** * *:
4hom_A_1     500:FLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYD: 599
SecStr          :  S TT    S  TTTT   EEE EEETTEE   EEE SSSEEE GGG   TT  EEESGGG SS EEEE HHHHHHHHHHHHH GGGS HHHHHHHHHH:    
ExpBur          :bbbeeeeeeeeebeeebbbbbbbbbbeeeeebeebbbeeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbeebbebbeeebeebebbbbbbbbbb:    
Contact         :     b b                                                                                            

queryA       665:AFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNG: 764
                : **** ** ******* *****  *  **** ********* ************* ** *** *** **   * ** * ********** **********:
4hom_A_1     600:SFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNG: 699
SecStr          :HHHHHHTTSS HHHHHHTTGGGGG  SHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHHHTT:    
ExpBur          :bbebbebeebebebbbebbebbeebeebbbbbbbeebbeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbeebbebbbbbbbbebbbebe:    

queryA       765:VPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTII: 864
                : * **     ** ***  * *********** *********   ***** *   * ********* ***** * * ***** ***************** :
4hom_A_1     700:LPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATSTIN: 799
SecStr          : HHHHHHHHHHHHHHHH TTS  S GGGHHHHHHHHHHHS HHHHHHHHHHHHH  SHHHHHHHHHHHTT   HHHHHHHHTTTT TTTS GGGHHHHHH:    
ExpBur          :beebeebbeebbeebeeeeeeeebebbbbebbbebbbeeeeeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebeeeeebeeebbbebbb:    

queryA       865:SITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTE: 964
                :**  ***** * ************ ************** ****** * ********** *   ******************************* ** *:
4hom_A_1     800:SIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIE: 899
SecStr          :HHHHSTTHHHHHHHHHHHT TTTTTSSSSS   HHHHHHHHHTT  SHHHHHHHHHHHT  SSS  GGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbebeebbebbbebbeeebebbeebeeeeebebeebbebbbebbbeeebbeebeebbeeeeeeebeebeebbeebbeebeebbebbeebeeebbebbee:    

queryA       965:NS: 966
                : *:
4hom_A_1     900:HS: 901
SecStr          :H :    
ExpBur          :eb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123