Protein Model on 4hom_A_1_B_1 (TEMPLATE: 4hom )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [902 aa] Aminopeptidase N :AMPN_PIG
2 b B 1 (B) polymer(polypeptide(L)) [11 aa] substance P 213Q 351A 352G 353A 354M 355E 380E 384T 385V 388H 389E 411E 415S 418E 419Y 434L 437L(P) 438N(G) 439D 441Y 442R 445A 472F 477Y 478S 568L 663N(Y) 667N 692Y 696E(Q) 700S 701S (identity: 87.5 %/79.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4hom_A_1 identity=79.8%
queryA        67:QSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHL: 166
                :*** ******* ** **** **********  *** *** * *** * * **************  *** ******* ** * ** ***** ********:
4hom_A_1       1:QSKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYT-TQGHMVVLRGVGDSQVPEIDRTELVELTEYLVVHL:  99
SecStr          :   GGGSSS  SSEEEEEEEEEEEE  S  SSS  EEEEEEEEEEEESS EEEEEEE  S EE - SSSS EEEESTT     EEEEEEETTTTEEEEEE:    
ExpBur          :eeeebeeeebeebbebebbebebbbebeeeeeeebebebebebebebeeebebbbbbbbebebe-beeeebebeeeeebeebebeebeebeebbbbbbbb:    

queryA       167:KGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNV: 266
                :****     *** *** ******************** ** ******  **************** ********  ******* *** **** ***** *:
4hom_A_1     100:KGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSV: 199
SecStr          :EEEE TT EEEEEEEEEEE  SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B  STT  BEEEEEEEEETTSEEEESS BSSS EE TT TTEEE:    
ExpBur          :eeebeeeeebebbbebebebbeeebbbbbbebeeeeeebbbbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbeeeeeeeebeeeeebbb:    
Contact         :                                              b                                                     

queryA       267:TEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENS: 366
                :*** *** ******* *****  *   * *********** *** *** ************** ** * ********* ******************** :
4hom_A_1     200:TEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENA: 299
SecStr          :EEB    SB GGG  EEEES EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTTS  SSSEEEEEEETT TT EE  TTEEEEEHHH:    
ExpBur          :bebeebeebbbbbbbbbbbebeebeeebeeebebebbbebebbeeebbebbbebbbebbebbeebbebebbbebbbbbbbbebeeebbbbbbbbbbebeb:    
Contact         :                                                                                    bbbbb           

queryA       367:LLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPA: 466
                :***** *** ************************  ********************* ********** *  ***************** *** * ****:
4hom_A_1     300:LLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPA: 399
SecStr          :H   TTT  HHHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHHHHTSTT   S   GGG  SHH:    
ExpBur          :bbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbeeebebbbbeeeebebee:    
Contact         :             b   bb  bb                     b   b  bb              b  bbb bb  b                     

queryA       467:QISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEH: 565
                :**** ** ********* **** ** ** ** ******* ****** ** ** *** **    ** ** *** ** *************** **  ** *:
4hom_A_1     400:QISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQKH: 499
SecStr          :HHHTTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTSEE HHHHHHHHHHHHHT SS   SS HHHHHHHHHSS S EEEEEETTTTEEEEEE:    
ExpBur          :ebeebeeebbebbbbbbbbbbbebbeeebbeebbbbbbeebeeeebebeebbebbbebbeeeeeeebeeebebbbbbbbebbbbbbbebebeebebebeb:    
Contact         :     b    bb                                                                                        

queryA       566:FLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIIND: 664
                :****  ***** * * * ***** **  *  *  *** **  ****** *    ***** *****  ***** *** ** ***   * ******** * *:
4hom_A_1     500:FLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYD: 599
SecStr          :  S TT    S  TTTT   EEE EEETTEE   EEE SSSEEE GGG   TT  EEESGGG SS EEEE HHHHHHHHHHHHH GGGS HHHHHHHHHH:    
ExpBur          :bbbeeeeeeeeebeeebbbbbbbbbbeeeeebeebbbeeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbeebbebbeeebeebebbbbbbbbbb:    
Contact         :  b                                                                                               b 

queryA       665:AFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNG: 764
                : **** ** ******* *****  *  **** ********* ************* ** *** *** **   * ** * ********** **********:
4hom_A_1     600:SFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNG: 699
SecStr          :HHHHHHTTSS HHHHHHTTGGGGG  SHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHHHTT:    
ExpBur          :bbebbebeebebebbbebbebbeebeebbbbbbbeebbeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbeebbebbbbbbbbebbbebe:    
Contact         :  b                        b   b   bb                                                               

queryA       765:VPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTII: 864
                : * **     ** ***  * *********** *********   ***** *   * ********* ***** * * ***** ***************** :
4hom_A_1     700:LPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATSTIN: 799
SecStr          : HHHHHHHHHHHHHHHH TTS  S GGGHHHHHHHHHHHS HHHHHHHHHHHHH  SHHHHHHHHHHHTT   HHHHHHHHTTTT TTTS GGGHHHHHH:    
ExpBur          :beebeebbeebbeebeeeeeeeebebbbbebbbebbbeeeeeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebeeeeebeeebbbebbb:    

queryA       865:SITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTE: 964
                :**  ***** * ************ ************** ****** * ********** *   ******************************* ** *:
4hom_A_1     800:SIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIE: 899
SecStr          :HHHHSTTHHHHHHHHHHHT TTTTTSSSSS   HHHHHHHHHTT  SHHHHHHHHHHHT  SSS  GGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbebeebbebbbebbeeebebbeebeeeeebebeebbebbbebbbeeebbeebeebbeeeeeeebeebeebbeebbeebeebbebbeebeeebbebbee:    

queryA       965:NS: 966
                : *:
4hom_A_1     900:HS: 901
SecStr          :H :    
ExpBur          :eb:

Input Residue Numbers for Focused Sites

ex) 2,15,123