Protein Model on 4f5c_B_1_CA_1 (TEMPLATE: 4f5c )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) B 1 (B) polymer(polypeptide(L)) [900 aa] Aminopeptidase N :AMPN_PIG
2 b CA 1 (B) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 596Q(M) 625N (identity: 50.0 %/79.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4f5c_B_1 identity=79.3%
queryA        64:TLDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLV: 163
                :****** ******* ** **** **********  *** *** * *** * * **************      ******* ** * ** ***** *****:
4f5c_B_1      42:TLDQSKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFICQEPTDVIIIHSKKLNYTXXX-XMVVLRGVGDSQVPEIDRTELVELTEYLV: 140
SecStr          :    SSTTSSSS  TTEEEEEEEEEEEEEEEEETTTEEEEEEEEEEEEEESS EEEEEEE  S EE -----  EEEE TT    EE    EETTTTEEE:    
ExpBur          :eeeeeeebbeeebeebbebebbebebbbbbeeeeeeebebebebebebebeeebebbbbbbeebebe-----ebebeeeeebeeeeeeeeeebeebbbbb:    

queryA       164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPN: 263
                :*******     *** *** ******************** ** ******  **************** ********  ******* *** **** ****:
4f5c_B_1     141:VHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN: 240
SecStr          :EEEEEEE TT EEEEEEEEEEE  SSSSEEEEEEEEETTEEEEEEEEE SSS STTTS B  SSSS BEEEEEEEEETTSEEEESS BSSS EE SSSTT:    
ExpBur          :bbbeeebeeeeebebebebebebbeeebbbbbbebeeeeeebebbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbbeeeeeeebeeeee:    

queryA       264:WNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYR: 363
                :* **** *** ******* *****  *   * *********** *** *** ************** ** * ********* ******************:
4f5c_B_1     241:WSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYR: 340
SecStr          :EEEEEB    SB SSS  EEEES EEEEEE TTS EEEEEE HHHHHTGGGTHHHHTHHHHHHHHHHHTTS  SSSEEEEEEESS SSSEE  TTEEEEE:    
ExpBur          :bbbbebeebeebbbbbbbbbbbebeebeeebeeebebebbbebebbeeebbebbbebbbebbebbeebbebebbbebbbbbbbeebeeebbbbbbbbbbe:    

queryA       364:ENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEIN: 463
                :** ***** *** ************************  ********************* ********** *  ***************** *** * *:
4f5c_B_1     341:ENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVN: 440
SecStr          :HHHH   TTT  HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHTTTTSTT   S   GGG  :    
ExpBur          :bebbbbbeebbbbebeeebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbeeebebbbeeeeebe:    

queryA       464:TPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLS: 562
                :******* ** ********* **** ** ** ** ******* ****** ** ** *** **    ** ** *** ** *************** **  *:
4f5c_B_1     441:TPAQISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNIS: 540
SecStr          :SHHHHHTT  SHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTEEE THHHHHHHHHHHTT SSS  SS HHHHHHHHHSS S EEEEEETTTTEEE:    
ExpBur          :eeeebeebeeebbebbbbbbbbbbbebbeeebbeebbbebbeeebeeebebebbbebbbebbeebeebebeeebebbbbbbbebbbbbbbebebeebebe:    

queryA       563:QEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661
                :* *****  ***** * * * ***** **  *  *  *** **  ****** *    ***** *****  ***** *** ** ***   * ******** :
4f5c_B_1     541:QKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQV: 640
SecStr          :EEE  SSSS       TTSS   EEE EEETTEE   EEE SSSEEE GGG   SS  EEESGGG SSSEEEE TTHHHHHHHHHHS GGGS HHHHHHH:    
ExpBur          :bebbbbeeeeeeeeeeeeebbbbbbbbbbeeeeebeebbbeeeeeeeeebbeeeeeebbbbbbebbbbbbbbbeeebbeebbebbeeebeebebbbbbbb:    
Contact         :                                 b                             b                                    

queryA       662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTAC: 761
                :* * **** ** ******* *****  *  **** ********* ************* ** *** *** **   * ** * ********** *******:
4f5c_B_1     641:IYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTAC: 740
SecStr          :HHHHHHHHHHTSS HHHHHHTTGGGGG   HHHHHHHHHHHTTHHHHSTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbebbebeebebebbbebbbbbeebeebbbbebbbeebeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbebbbebbbbebbbebbb:    

queryA       762:SNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATS: 861
                :*** * **     ** ***  * *********** *********   ***** *   * ********* ***** * * ***** ***************:
4f5c_B_1     741:SNGLPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATS: 840
SecStr          :HTT HHHHHHHHHHHHHHHTSTTS  S HHHHHHHHHHHTTTS HHHHHHHHHHHHH  SHHHHHHHHHHGGG   HHHHHHHHHHTT TTTS HHHHHH:    
ExpBur          :ebebeebeebbeebbeebeeeeeeeebebbbbebbbebbbeeeeeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebbeeebbeeeebbe:    

queryA       862:TIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQW: 961
                :** **  ***** * ************ ***  ********* ****** * ********** *   ******************************* *:
4f5c_B_1     841:TINSIASNVIGQPLAWDFVQSNWKKLFQDYGXXSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNW: 940
SecStr          :HHHHHHTSTTHHHHHHHHHHHSHHHHHHTT --   HHHHHHHHGGG  SHHHHHHHHHHHHHT SS   TTTHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbbebbebeebbebbbebbeeebeebeeeee--ebebeebbebbbebbbeeebbeebeebeeebeeeebeeeeebbeebbeebeebbebbeebeeebbeb:    

queryA       962:FTENS: 966
                :* * *:
4f5c_B_1     941:FIEHS: 945
SecStr          :HHHTT:    
ExpBur          :beeeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123