Protein Model on 4e36_A_1_G_1 (TEMPLATE: 4e36 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [869 aa] Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN
2 b G 1 (A) non-polymer(LYS) LYSINE 211Q(D) 213Q(E) 351A(P) 353A 355E 388H 389E 392H 410N(K) 411E 477Y (identity: 63.6 %/36.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4e36_A_1 identity=36.0%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLSQGHRVVLRGVGGSQP----PDIDKTELVEPTEYLV: 163
                :*   ***    *  *     * **  *     *  *         **  ** *** *   * **           *        *      *  * * * :
4e36_A_1      64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEXXXYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157
SecStr          :  SSS  SSS   EEEEEEEEETTTTE-----EEEEEEEE   SS  SEEEEE SS EEEEEEEE   ---  SS EE EEEEEGGGTEEEEE S-S   :    
ExpBur          :eeeeebbeebebebbebbbebebeeee-----bebebebebebeeebeebbbbbeebeeeebebebee---ebeeeeebeebeeeeebbbbbebe-eebe:    

queryA       164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259
                : ***        *     *   * *   *** * *   *      * *      **  *******  ** * *         ***** **     *    :
4e36_A_1     158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248
SecStr          :TT  -------- EEEEEEEEE BSSSSEEEEEEEE TT  EEEEEEEE TTTTGGGTS B  STT  BEEEEEEEE TT EEEESS- EEEEEE TTS :    
ExpBur          :eeee--------bebebebeeebeeebebbbebebebeeeeeeebbbbbbbbbbbbebbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeebeeee:    
Contact         :                                                b b                                                 

queryA       260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358
                : **       * ** ****** * **  *       * **   * * *      *  ***      * *     *  *** * * *  ***  *******:
4e36_A_1     249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340
SecStr          :EEE------EE    SB GGG  EEEE  EEEEEE TTS EEEEEE GGGTTTHH--HHHHHHHHHHHHHHHHHT    SSEEEEEEESS SSSEE  TT:    
ExpBur          :bbb------bbeebeebbbbbbbbbbbebeebebebeeebebbbbbbeebeebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbb:    
Contact         :                                                                                            b b b   

queryA       359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458
                :* **** ******  ** * *  *  **************** ***** ** **** * *        *     *   **    *   * * ** * * *:
4e36_A_1     341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439
SecStr          :EEEEEHHHH   TTT  HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGGHHHHHHHHHHHHHHHHHH TTS HHHHH-HHHHHHHHHHHTSTT   SS  :    
ExpBur          :bbbbbbebbbbeeebbbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbee:    
Contact         :                             bb  b                 bb                                               

queryA       459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538
                :*    ** ** * **  ** ***  * **  ** *  *  *   **  * * *     **  *                                  *  :
4e36_A_1     440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSXXXXXXXXXXXXXXXXXXXXXXXXXLGENAEVKE: 536
SecStr          : --- SHHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHTTTTEEE HHHHHHHHH  -------------------------  S   HHH:    
ExpBur          :b---eeebebbbbbbebbebbbbbbbbbbbeebeeeebeebbbebbeebeeebbebebbbebbbee-------------------------eeeeeebee:    
Contact         :                  b                                                                                 

queryA       539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFL--LDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNY: 634
                : *  **** * *   *  *     * ** **                * *  * *                     *       **  *    *** * *:
4e36_A_1     537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGXXXXXXXXXXXQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYIVHY: 635
SecStr          :HHHHHHHS SEEEEEEEEETTEEEEEEEEE   -----------  S      EEEEESS    EEE   SSE-EEEE SS  S EEESGGG SSSB  E:    
ExpBur          :bbebbbebebbbbbbbeeeeeebebebebbebe-----------eeebebbbbbbbbbeeeeeeeeeebbeee-eebebeeebebbbbbbbbebbbbbbb:    

queryA       635:DEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTPLFI: 731
                :    *    ***   *       *   * * * *  *       **  *  *  *         ** *  *  * **   *      * **     *   :
4e36_A_1     636:EGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVI-: 734
SecStr          :ETTHHHHHHHHHHS GGGS HHHHHHHHHHHHHHHHHTSS HHHHHHHTTGGGT   HHHHHHHHHHHHHHHHHHHHS  HHHHHHHHHHHHHTTHHHH-:    
ExpBur          :eeebbeebbebbeeebeebeebbbbbbbbbbbbbbeeeebebeebbebbebbeebebbbbbbbbbebbbebbebbebeebeebbebbeebbbebbbebb-:    

queryA       732:HFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAA: 831
                :        *        *          **      *      ** ****      *       **           *    **        *  *   *:
4e36_A_1     735:----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKILYA: 827
SecStr          :----TT  SS - S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S   HHHHHHHH--HHHTTSHHHHHHHHHHHHH   HHHHHHHHHH:    
ExpBur          :----eebebee-eeebbebbbbeebbebbbebeeeebeeebeebbeebeeeeeeeebebbbbebbb--bbbbeeeebbebbbebbeebbbbbbbebbbeb:    

queryA       832:LACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFG: 931
                :*  **    *            *  *        *     ** * ****  **  *      **      *   *  **    **    *    *    *:
4e36_A_1     828:LSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ--G: 925
SecStr          :HTT   HHHHHHHHHHHHH SSS GGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHS TTSHHHHHHHHHTTTT  SHHHHHHHHHHHHHS SS--S:    
ExpBur          :bbbbeeeebbeebbebbbeeeebebbebbebbeebbeeeebbebbbebbeeebeebbeebebbbebbbbbbebbbebbbbeebbeebeebbeebeee--b:    

queryA       932:SGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967
                :*        **    ****   *      *   *  :
4e36_A_1     926:SHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961
SecStr          :   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH :    
ExpBur          :eebebbebbbbbbebbbebbeebbebbeebbeeeee:    


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