#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | G 1 (C) | polymer(polypeptide(L)) [1097 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | I 1 (G) | polymer(polypeptide(L)) [108 aa] | 1-57 Fab light chain | 446G 447G 449Y 493Q 494S 498Q (identity: 100.0 %/96.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ls9_G_1 identity=96.6% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :*********************************************************** **************************************: 7ls9_G_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : EEEE S B SS S EEEEEEEE TTEEEEEEESS --- EE SS EEEEEEESS EEEEEEESS STT: ExpBur :eeeebeeeeeeeeeebebebbbbbbeeeeebeeebeebeeebbbbeeebbbbebeeeee---eeebebbebebeebbbbbbbbeebbbbbbbbbbebbee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :********************************* **************************** *****************************: 7ls9_G_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHXXXXXXMESEFRVYSSANNCTFEYVSQPFLMDLEXXXXNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEEE SS EEEEEEEEEE SS EEEE ------ EEEE SEEEEEEEEEEE S SS ---- EEEEEEEEEETTEEEEEEEEEE S : ExpBur :eebbbbbbeeeebbbebbebebbebbbbbbeee------eeeeebbeeeeeeeeeeeeeeebbeebe----eeebbbbbbbbeeeeebebbbeebebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :************************************ ****************************************************: 7ls9_G_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLXXXXXXXXXXXXAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SS SS BEEEEEE EEEEEE S ------------ EEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHTSS SEEE: ExpBur :eebeeeeebbeeebebebebebeebbbbbbbeeeee------------ebbbbbbebeebbbbbebbeebebeebbbbbbebbbbbbbeeebbebeebeb: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7ls9_G_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :E S B B SB THHHHHT S SSS EEEEE SSB TTHHHH SEEEEESS SGGGSS EEEEEEEEEEEE GGGGGGSSTT: ExpBur :ebeeebbeeeeebbbbbeeeeebebeebbeeeebbbbeebeeeebeebbbeeeebeeeeeeeeeebbebeeeebeebbbbebebbbbbbbeebbebbbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7ls9_G_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SHHHHHT TT EEEEEEE TTTT TT B EEE SS TT EE SSS S BTTEE SEEE B TTS GGGS EEEEEE: ExpBur :eebebbbebbebbeebebbbbbbebbeebbeeebbeebebbeeeeeebeeeeebeeeeeeeeeeeeeeeeeeeebeebbeebbbeeeeeebebbbbbbbb: Contact : bb b bb b queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7ls9_G_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEEESSS EE S TTSEEEEEETTEEEEEEEEE TT EE SSSSS EEE SSS EEEEEESS S EEEEE TTT S EEEEE: ExpBur :bbeeeeeebebbbeeeeeeeeeeebbebbbbbbeeebbbeeeeeebeeeebbbeeeeeeebbbbbeeeeebbebeebeeeebbbbbbbbeeeeebbbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :*************************************************************** *************************: 7ls9_G_1 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :T GGGHHHHHTTTSS HHHHHTTS S EE SSEEEESSEE SS SEEEETTEEEEE ------------ EEEEE S TTEEE: ExpBur :ebebeebeebbbbeebbeebeebbeeeeebebeebbbbbbeebeeeeeeebebeeebbbbbee------------eeebbbbeebeeeeeeeeeeeeebe: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7ls9_G_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :EEEEEEEEEEEEEEE EEE HHHHTTTT S HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SS S STT TTTS SSSSS: ExpBur :bbeebebebeebbbbbbbbbbbbebeebbbeebeeeeebeeeebeebeebeeebeebbeebbebbeebbbebeeeeeeeeeeebeebebeebbbeeeeee: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :****************************************************************************************************: 7ls9_G_1 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 SecStr : HHHHHHHHHS TT STHHHHHTT SS S HHHHHHTTTEEE SS HHHHHHHHHHHHHHHHHHTTHHHHSS HHHHHHHHHHHHT H: ExpBur :eebebbebbbeebeebebebeebbeebbbbeeebeeebbeebebbbbeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7ls9_G_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHSHHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHHHHHHTS SSS SSHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbeebbeebeeeeeebeebbebbbebbebbbebebebeeeeebebeebeebbeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7ls9_G_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHHTSS SSSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEE BS EEETTEEEEESSSEEEEETTEEEEE SSS B: ExpBur :bbeebeebbeebbebbeebbbbebeeeebbeeeebbbbbbbbbbbbbbbbbbbbeeeeeeebeebebbbeeeebbeeeeebbbbeeeebbbbbebbeeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 :**********************************: 7ls9_G_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 SecStr : BTTTEEEEEETTSSTT EE B SHHHHH : ExpBur :ebbeeebeeeeebeebeeeeeeebeeeeeeeeee: |