[pdbjlvh2]Protein Model on 7ls9_A_1_B

#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7ls9_A_1_B_1

Protein Model on 7ls9_A_1_B_1 (TEMPLATE: 7ls9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [1097 aa]	Spike glycoprotein :SPIKE_SARS2
2	b		B 1 (H)	polymer(polypeptide(L)) [129 aa]	1-57 Fab heavy chain	351Y 444K 445V 446G 447G 448N 449Y 450N 452L 470T 490F 492L 493Q 494S (identity: 100.0 %/96.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7ls9_A_1 identity=96.6%

queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :***********************************************************   **************************************:
7ls9_A_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :              EEEE S   B S SS   S EEEEEEEE  TTEEEEEEESS    ---        EE SS EEEEEEESS  EEEEEEESS SSS:    
ExpBur          :eeeebeeeeeeeeeebebebbbbbbeeeeebeeebeebeeebbbbeeebbebebeeeee---eeebebbebebeebbbbbbbbeebbbbbbbbbbebeee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :*********************************      ****************************    *****************************:
7ls9_A_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHXXXXXXMESEFRVYSSANNCTFEYVSQPFLMDLEXXXXNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEEE SS EEEEEE   B SS    EE  ------ EE   SBS   S  EEE  S SS    ----   EEEEEEEEEETTEEEEEEEEEE  S :    
ExpBur          :eebbbbbbeeeebbbebbebebbebbbbbbeee------eeeeebbeeeeeeeeeeeeeeebbeeee----eeebbbbbbbbeeeeebebbbeebebeee:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :************************************            ****************************************************:
7ls9_A_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLXXXXXXXXXXXXAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SS  SS   BEEEEEE       EEEEEE   S   ------------  EEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHTSS   SEEE:    
ExpBur          :eebeeeebbbeeebebebebebeebbbbbbbeeebe------------ebbbbbbebeebbbbbebbeebebeebbbbbbebbbbbbbeeebbebeebeb:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7ls9_A_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :E    S     B  B     SB THHHHHT S    SSS EEEEE SSB   STHHHH   SEEEEESS SGGGSS EEEEEEEEEEEE SSSTTTSSTT:    
ExpBur          :ebeeebbeeeeebbbbeeeeeebebeebbeeeebbbbbebeeeebeebbbeeeebeeeeeeeeeebbebeeeebeebbbbebebbbbbbbeebbebbbee:    
Contact         :                                     b                                                              

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7ls9_A_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :  SHHHHHT    TT  EEEEEEE TTTTS TT B   EEE   SS   TT        EE SSS  SS  BTTEE SEEE  B TTS GGGS EEEEEE:    
ExpBur          :eebebbbebbebbeebebbbbbbebbeebbeeeebeebebbeeeeeebeeeeebeeeeeeeeeeeeeeeeeeeebeebbeebbbeeeeeeeebbbbbbbb:    
Contact         :                              bbbbbbb b                 b                   b bbb                   

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7ls9_A_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :EEEESSS  SEE S        SSEEEEEETTEEEEEEEEE      TT  EE SSSSS  EEE SSS  EEEEEESS S  EEEE  TTT    EEEEE:    
ExpBur          :bbeebeeebebbbeeeeeeeeeeebbebbbbbbeeebbbeeeeeebeeeebbbeeeeeebbbbbbbeeeebbebeebeebebbbbbbbeeebeebbbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :***************************************************************            *************************:
7ls9_A_1     614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :T  TTSHHHHHTTTTS TTTTTTTSSS EEE SSEEEESSEE SS    SEEEETTEEEEE  ------------   EEEEE   S        TTEEE:    
ExpBur          :ebebeebeebbbbeebbeebeebbeeeeebebeebbbbbbeebeeeeeeebebeeebbbbbee------------eeebbbbeebeeeeeeeeeeeeebe:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7ls9_A_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr          :EEEEEEEEEEEEEEE     EEE HHHHHTSS S  HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH SS        S  STT   TTTSB SSSSS:    
ExpBur          :bbbebebebeebbbbbbbbbbbbebeebbbeebeeeeebeeeebeebeebeeebeebbebbbebbeebbbebeeeeeeeeeeebeebebebbbbeeeeee:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :****************************************************************************************************:
7ls9_A_1     814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          :  BHHHHHHHHHS TT STHHHHHTT SS  S   HHHHHHTTSEEE   SS HHHHHHHHHHHHHHHHHHTTHHHH S     HHHHHHHHHHHHT  H:    
ExpBur          :eebebbbbbbeebeebeeebeebbeebbbeeeebeeebbeebebbebeeeebeeeebbebbbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7ls9_A_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :HHHHHSHHHHHHHHHHHHHHHHHHHHTT    HHHHHHHHHHHHHHHHHHHHTTS SSSS SSHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebeeebeeeeeebeebbebbbebbebbbebebebeeeeebebeebbebbeeeeeeebeebbbebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7ls9_A_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHHTTTS    SSSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEEETTEEEEE SSS   B:    
ExpBur          :bbeebeebbeebbebbeebbbbebeeeebbeeeebbbbbbbbbbbbbbbbbbbbbeeeeeebeebebbbeeeebbeeeeebbbbeeeebbbbbebbeeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
                :**********************************:
7ls9_A_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
SecStr          :  BTTTEEEEEETTSSTT EE   B SHHHHH  :    
ExpBur          :ebbeebbeeeeebeeeeeeeeeebeeeeeeeeee:

Protein Model on 7ls9_A_1_B_1 (TEMPLATE: 7ls9 )

Input Residue Numbers for Focused Sites