#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [1087 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | JA 1 (C) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 709N (identity: 100.0 %/95.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7lqv_C_1 identity=95.7% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :****************************************************************************************************: 7lqv_C_1 33:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 132 SecStr : S S EEEE S SS SEEEEEEEEE TTEEEE SEE SSS EE EE TT EEEE SS EEEEEEESSSSSS: ExpBur :eebebeeeeeeeebebebeebbbbbeeeeeeeeeeeebebebbbbebebeebebbeeeeeeeeeebbbbebebeebbbbbbbbeeebbbbbbbbeebeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :**************************************************************** ****************************: 7lqv_C_1 133:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLV: 232 SecStr :S BEEEEEETTEEEEEEE B SS EEEE TTTTSSS EEE TTBS SEEEEE S S -------- EEEEEEEEETTEEEEEEEEE S : ExpBur :ebbbbbbbeeeebbbebbbbebbebbbbbbeeeeeeeeebeeeebbbeeeeeeeeeeeeebbbe--------ebebbbbbbbbeeeebebbbeebebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :****************************************************************************************************: 7lqv_C_1 233:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 332 SecStr :SSS SS EEEEE EEEEEEEEB SS B EEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHT SS SEEE: ExpBur :eebeeeebbbeeeeebebeeebeebbbbbbbebeeeeeeeeebebebeebebbbbebeeeebbbebbeebebeebbbbebebbbebbbeeeebebeebee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7lqv_C_1 333:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 432 SecStr :EEEEEE S EEEE THHHHT S STT EEEEE S B GGGTSS TT B SS GGGGGG EEEEEEEEEEEE STTSGGGSSS: ExpBur :ebeebebeeeeebbbbeeeeeebeeeebbebeebeebeebeeeebbebbbebeebeebeeeeeeeeeeeeeeebbeebbbebebbbbbbbbebbebeeee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :******************************* *******************************************************************: 7lqv_C_1 433:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 532 SecStr : SSSSTTTT SS BEEEEE STTT -- SS TT SSSS SS BTTB TTS TTTS EEEEEE: ExpBur :eeeebbeebbbbbeebebbbbbbebeeebbe--eeeeeebbeebeeebeeeeeeeeeeeeeeeeeebeeeeeeebeeeeeebebeeeeeebebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7lqv_C_1 533:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 632 SecStr :EEE S SEE S SSEEEEEETTEE EEEEE S TT EEE TTS EEEEE SSS EEEEE EEEEEEEE TTT EEEEE: ExpBur :bbeeeeeebebbbeeebeebeeeebbebbbbebeeebbbeebeeebeeeebbbeeeeeebebbbbbeeeebbebeebeebbbbbbbbbeeebeebbbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :*************************************************************** *************************: 7lqv_C_1 633:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 732 SecStr :T GGGSGGGTTGGGS GGGGGGGS S EEE SSEEEESEEE S B SEEEETTEEEEEE ------------ EEEEEEB S TTEEE: ExpBur :ebebeebeebeebeeeeeebeebeeeeeeeebebbbbbbbeeeeeeeebebebeeebbbbeee------------eebbbbbeeeeeeeeeeeeeeeeee: Contact : b queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7lqv_C_1 733:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 832 SecStr :EES EEEEEEEEEEE EE HHHHHSTT HHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHTT SS SS STT TTTS SSSSS: ExpBur :bbbebebebebebbbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbbebeeeeeeeeeeebeebebeebbeeeeeeb: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :************** *************************************************************: 7lqv_C_1 833:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 932 SecStr : HHHHHHHHH ------------------------- GGGTEE SS HHHHHHHHHHHHHHHHHTTTGGGGSS HHHHHHHHHHTTTS H: ExpBur :ebbebbbbbbeebe-------------------------eeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7lqv_C_1 933:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1032 SecStr :HHHHHTHHHHHHHHHHHHHHHHHHHHSS THHHHHHHHHHHHHHHHHHHGGG TTSS SSHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbeebeeebeeeeeebeebeebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7lqv_C_1 1033:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1132 SecStr :HHHHHHHHHHHHHHHHHHTTTS STBTTBSSEEEEEEEEEETTEEEEEEEEEEE EEEEEEES EESSSSEEEESSSEEEESSSSEEEE SSS E: ExpBur :bbeebbeebeebbebbeebbbbbbeeeebbbeeebbbbbbbbbbebbbbbbbbbeebeeeebebbebbbeeeebbeeeebbbbbeeeebbbbbebbbbee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 :**********************************: 7lqv_C_1 1133:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1166 SecStr :E BGGGEEE S TTSSTT EE B SSTGGG : ExpBur :ebbeeebeeeeeeeeeeeeeeeebeeeeeeeeee: |