#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7lqv_C_1_H_1

Protein Model on 7lqv_C_1_H_1 (TEMPLATE: 7lqv )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) C 1 (C) polymer(polypeptide(L)) [1087 aa] Spike glycoprotein :SPIKE_SARS2
2 b H 1 (Y) polymer(polypeptide(L)) [125 aa] 4-8 Heavy Chain 14Q 144Y 146H 154E 155S 156E 157F 158R 161S 246R 249L 250T 251P 252G 253D (identity: 100.0 %/95.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7lqv_C_1 identity=95.7%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :****************************************************************************************************:
7lqv_C_1      33:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 132
SecStr          :       S   S  EEEE S      SS    SEEEEEEEEE  TTEEEE   SEE  SSS   EE    EE TT EEEE   SS  EEEEEEESSSSSS:    
ExpBur          :eebebeeeeeeeebebebeebbbbbeeeeeeeeeeeebebebbbbebebeebebbeeeeeeeeeebbbbebebeebbbbbbbbeeebbbbbbbbeebeee:    
Contact         :b                                                                                                   

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************        ****************************:
7lqv_C_1     133:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLV: 232
SecStr          :S BEEEEEETTEEEEEEE   B SS  EEEE TTTTSSS EEE TTBS   SEEEEE  S S  --------   EEEEEEEEETTEEEEEEEEE  S  :    
ExpBur          :ebbbbbbbeeeebbbebbbbebbebbbbbbeeeeeeeeebeeeebbbeeeeeeeeeeeeebbbe--------ebebbbbbbbbeeeebebbbeebebeee:    
Contact         :                              b b       bbbbb  b                                                    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :****************************************************************************************************:
7lqv_C_1     233:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 332
SecStr          :SSS SS     EEEEE       EEEEEEEEB     SS      B      EEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHT SS  SEEE:    
ExpBur          :eebeeeebbbeeeeebebeeebeebbbbbbbebeeeeeeeeebebebeebebbbbebeeeebbbebbeebebeebbbbebebbbebbbeeeebebeebee:    
Contact         :                                b  bbbbb                                                            

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7lqv_C_1     333:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 432
SecStr          :EEEEEE   S EEEE         THHHHT S    STT EEEEE S B  GGGTSS TT     B SS GGGGGG EEEEEEEEEEEE STTSGGGSSS:    
ExpBur          :ebeebebeeeeebbbbeeeeeebeeeebbebeebeebeebeeeebbebbbebeebeebeeeeeeeeeeeeeeebbeebbbebebbbbbbbbebbebeeee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :*******************************  *******************************************************************:
7lqv_C_1     433:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 532
SecStr          : SSSSTTTT    SS   BEEEEE STTT  --           SS   TT          SSSS  SS  BTTB          TTS TTTS EEEEEE:    
ExpBur          :eeeebbeebbbbbeebebbbbbbebeeebbe--eeeeeebbeebeeebeeeeeeeeeeeeeeeeeebeeeeeeebeeeeeebebeeeeeebebbbbbbbb:    

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7lqv_C_1     533:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 632
SecStr          :EEE S    SEE S        SSEEEEEETTEE  EEEEE S    TT  EEE TTS EEEEE SSS  EEEEE   EEEEEEEE  TTT    EEEEE:    
ExpBur          :bbeeeeeebebbbeeebeebeeeebbebbbbebeeebbbeebeeebeeeebbbeeeeeebebbbbbeeeebbebeebeebbbbbbbbbeeebeebbbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :***************************************************************            *************************:
7lqv_C_1     633:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 732
SecStr          :T  GGGSGGGTTGGGS GGGGGGGS S EEE SSEEEESEEE S  B  SEEEETTEEEEEE ------------  EEEEEEB  S        TTEEE:    
ExpBur          :ebebeebeebeebeeeeeebeebeeeeeeeebebbbbbbbeeeeeeeebebebeeebbbbeee------------eebbbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7lqv_C_1     733:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 832
SecStr          :EES EEEEEEEEEEE      EE HHHHHSTT HHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHTT SS     SS  STT   TTTS  SSSSS:    
ExpBur          :bbbebebebebebbbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbbebeeeeeeeeeeebeebebeebbeeeeeeb:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :**************                         *************************************************************:
7lqv_C_1     833:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 932
SecStr          :   HHHHHHHHH  ------------------------- GGGTEE    SS HHHHHHHHHHHHHHHHHTTTGGGGSS     HHHHHHHHHHTTTS H:    
ExpBur          :ebbebbbbbbeebe-------------------------eeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7lqv_C_1     933:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1032
SecStr          :HHHHHTHHHHHHHHHHHHHHHHHHHHSS   THHHHHHHHHHHHHHHHHHHGGG  TTSS SSHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebeeebeeeeeebeebeebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7lqv_C_1    1033:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1132
SecStr          :HHHHHHHHHHHHHHHHHHTTTS   STBTTBSSEEEEEEEEEETTEEEEEEEEEEE  EEEEEEES EESSSSEEEESSSEEEESSSSEEEE SSS   E:    
ExpBur          :bbeebbeebeebbebbeebbbbbbeeeebbbeeebbbbbbbbbbebbbbbbbbbeebeeeebebbebbbeeeebbeeeebbbbbeeeebbbbbebbbbee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
                :**********************************:
7lqv_C_1    1133:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1166
SecStr          :E BGGGEEE S TTSSTT EE   B SSTGGG  :    
ExpBur          :ebbeeebeeeeeeeeeeeeeeeebeeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123