#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [1092 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | K 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 122N 154E 155S 157F (identity: 100.0 %/96.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7lqv_A_1 identity=96.1% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :****************************************************************************************************: 7lqv_A_1 33:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 132 SecStr : S S EEEE S SS S EEEEEEEE TTEEEE SEE SSS EE EE S EEEE SS EEEEEEESSSSSS: ExpBur :eebebeeeeeeeebebebebbbbbbeeeeebeeeeeebeebbbbbebebeebebbeeeeeeeeeebbbbebebeebbbbbbbbeeebbbbbbbbbebeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :**************************************************************** ****************************: 7lqv_A_1 133:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLV: 232 SecStr :S EEEEEE SS EEEEEE SS EE B TTTT SS B S S TTEEEEE S S -------- EEEEEEEEETTEEEEEEEEE S : ExpBur :eebbbbbbeeeebbbbbbbbebbebbbbbbeeeeeeeeeeebeebbbeeeeeeeeeeeeebbbe--------ebebbbbbbbbeeeebebbbeebebeee: Contact : b bb b queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :****************************************************************************************************: 7lqv_A_1 233:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 332 SecStr :SSS S EEEEEE EEEEEEEEB S SS S B S EEEE EEEEEEEEE TTS EEEEEESSS HHHHHHHHHTSS SEEE: ExpBur :eebeeeebbbeeebebebebebeebbbbbbbbbeeeeeeeeebebebeebebbbbebbebbbbbebeeebebeebbbbbbebbbbbbbeeeebebeebee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7lqv_A_1 333:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 432 SecStr :EE S HHHHS S SSS EEE S HHHHS TT SEEEESSS GGGGGG S EEEEEEEEEGGGTTT STT: ExpBur :ebeeeeeeeeeeeeeeeeeeeebebeebbebeebebbeebeeeebeebbbebeebeeeeebeeeebeeeeeeebeeebbbbbebbbbbbebeeeebbbee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :******************************* *******************************************************************: 7lqv_A_1 433:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKXXGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 532 SecStr : SHHHHHT TT SEEEEEE HHHH -- EEE SS SS B SSS SS TT B SEEE TT TTSSEEEEEEE: ExpBur :eeeebbbebbbbbeebebbbbbbebeeebee--ebeebbbbeeeeeebeeeeebeeeeeeeebeeebeeeeeeebeebbebbebeeeeeebebbebbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7lqv_A_1 533:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 632 SecStr :E S SS S SS SEE BTTB EEEEEE SS SEEE TTS EEEE TTT EEEE EEEEE TTT EEEEE: ExpBur :bbbeebbebbbbbeeeeeeeeeeebbebebbbeeeebeeeeeeeeeeeeeeebeeeeeeeebbbbeeeeebbebeebebeebbbbbbbbeebeebbbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :*************************************************************** *************************: 7lqv_A_1 633:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 732 SecStr :T STTHHHHHTGGG HHHHTTTSSS EEEETTEEEES EE SS SEEEETTEEEEEE ------------ EEEEEE TTEEE: ExpBur :ebebeebeeebbbeebeeebeebbeeeeeeebebbbbbebeebeeeeeeebebeeebbbbeee------------eebbbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7lqv_A_1 733:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 832 SecStr : S EEEEEEEEEEE EEEE HHHHTSTT HHHHHHHGGG SHHHHHHHHHHHHHHHHHHHHHHHHTT SS SS STT TTTS TTSSS: ExpBur :bbeebebebeeebbbbbbbbbbbebeebbbbebeebeebbeeeeeebeebeeebeebbeebbebbeebbbebeeeeeeeeeeebeebebebbbeeeeeee: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :*************** *****************************************************************: 7lqv_A_1 833:KRSFIEDLLFNKVTLXXXXXXXXXXXXXXXXXXXXLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 932 SecStr : HHHHHHHHTS -------------------- HHHHTTTTEEEE SS HHHHHHHHHHHHHHHHHHTTGGGGSS HHHHHHHHHHHHT H: ExpBur :ebbebbebbbebbee--------------------eeeebeeebbeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7lqv_A_1 933:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1032 SecStr :HHHHHTHHHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeebbeebbeebbebbeebbeebeeeeeebeebbebbeebeebbeebbeebeeeeebeeeebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7lqv_A_1 1033:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1132 SecStr :HHHHHHHHHHHHHHHHHHTTTS TTTSSSSEEEEEEEEEETTEEEEEEEEEEE EEEE S EESSSEEEEESSSEEEESSSSEEEE SSS B: ExpBur :bbeebeebbeebbebbeebbbbebeeeebbbeeebbbbbbbbbbebbbbbbbbbeebeeeebeebebbbeeeebbeeeebbbbbeeeebebbbebbebee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147 :**********************************: 7lqv_A_1 1133:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1166 SecStr : BTTTEEEEEETTTSSS EE B TTGGGS : ExpBur :ebbeeebeeeeebeeeeeeeeeebeeeeeeeeee: |