#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [1024 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | H 1 (N) | polymer(polypeptide(L)) [214 aa] | Fab 15033-7 light chain | 519H (identity: 100.0 %/90.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7kxk_B_1 identity=90.6% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :******************************************************* ************************************: 7kxk_B_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIXXXXXXXXXRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : EE TT B S SSEEEEEEEEE TT EEB B --------- EE TT EEEEEE SSS EEEEES SSS: ExpBur :eeeeeebeeeeeeeeeebeebbbbbbeeeeeeeeeeebebbbbbbeeebbbbbbe---------ebbbeebebeebbbbbbbbeebebbbbbbbebbeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************** ************************** ***************************: 7kxk_B_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVXXXXXXXXWMESEFRVYSSANNCTFEYVSQPFLMXXXXXXXXXKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :SEEEEEEE SS EEEEEEEEEE SS B -------- HHHHEEEEES EEEE S --------- EEEEEEEEEETTEEEEEEEEEE SST: ExpBur :eebbbbbbbeeebebebbbbebbebbbbee--------eebeeeebbeeeeeeeeeeeeeebee---------eebbbbbbbeeebebebbbebbebeee: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :******************************** ***************************************************: 7kxk_B_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHXXXXXXXXXXXXXXXXXAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :TS S BEEEEEEE EEEE B ----------------- EEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHTT SS SEEE: ExpBur :eebbeebbebeeebebebebebeebbbbbbee-----------------bbbbbbebeebebbbebbeebebeebbbbeeeebebbbbeeebbebeebeb: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7kxk_B_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EEEEEE SEEEEE SS THHHHS SS GGG EEEEE S HHHHHH SEEEEESS SS BSEEEEEEEEEEGGGGGG SBT: ExpBur :eeeeeebeeeeebbbbeebeeebebeebbeeeebbbbebbeeeebeebebebbebeeeeebeebebeebeeeeeeeeebbbbbbbbbbbebebbebbbbe: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7kxk_B_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SHHHHHT B TT EEEEEEE TTTS TT B S EEE SS TT EE SSS TT BTTEE SEEE B TT GGGSEEEEEEE: ExpBur :eeeebbeebbebbeebebbbbbbebeeebeeeebbeebebbeebeeebeeeeeeeeeebeeeeeeebeeeeeeebeebbeebebeeeeeebebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7kxk_B_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEE SS SB BSSEEEEEETTEEEEEEEEE SS TT EEE TTSSEEEEE SSS EEEEE SEEEEEEEE TTT EEEET: ExpBur :bbeeeeeeeebeebeeeeeeeeeebbebebeebeeebbbeebeeebeeeeeebeeeeeeeebbebbeeeebbebeebeebbbbbbbbbbeebeebbbbbe: Contact : b queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******* ************************************* *************************: 7kxk_B_1 614:DVNCTEVXXXXXXXXXXXXXXXXXXXSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :TS GGG ------------------- EE TT EEET EEEEEEE SEEEETTEEEEEE ------------ EEEEEEE S SSEEE: ExpBur :ebebeee-------------------eeebebebbbbeebeeeeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7kxk_B_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :EEEEEEEEEEEEEEE EEE HHHHHH S HHHHHHHGGGTTTTHHHHHHHHHHHHHHHHHHHHHH SSS SS TT TTTS TTSSS: ExpBur :bbeebebebeeebbbbbbebbbbebeebbbeeeeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeeeebeebebeebbbeeeeee: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :*** ********** ************************************** ****** **************: 7kxk_B_1 814:KRSPIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQ: 913 SecStr : HHHHHHHTT -------------------------- TTSEEE SS HHHHHHHHHHHHHHHHHTTTTTTSSS HHHHHHHHHHTTT T: ExpBur :ebbebbebbbeebe--------------------------eebbbeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebbe: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :**************************** ******************************************* **************************: 7kxk_B_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHTHHHHHHHHHHHHHHHHHHHTT GGGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebbebbeebbeebeeeeeebbebeebbeebeebbeebeeebeeeeebebeebeebeeebeeeebeeebeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7kxk_B_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHHTSS TTTTSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEE TT EEEETTEEEEE: ExpBur :ebeebeeebeebbebbeebbbeeeeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbbbeeebbbbeeeeeebbeebbeeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTV:1137 :************************: 7kxk_B_1 1114:IITTDNTFVSGNCDVVIGIVNNTV:1137 SecStr :E STTTEEEES TTTSTT EE : ExpBur :ebeeeebeeeeebeebeebeeeee: |